RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-223ENST00000533079 SAMD15Q9P1V8 674 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 GALPQ9UBC7 116 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 FBXW2Q9UKT8 454 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 MMACHCQ9Y4U1 282 aa11.55□□□□□ -0.56
CAPN1-223ENST00000533079 DVL2O14641 736 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 LCMT2O60294 686 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 HCN1O60741 890 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 MYO1DO94832 1006 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 UQCRC1P31930 480 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 RPL21P46778 160 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 MAN2A2P49641 1150 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 CCR8P51685 355 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 CRADDP78560 199 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 CBLBQ13191 982 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 SP140Q13342 867 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 FAM153CQ494X1 144 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 TMEM198Q66K66 360 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 LRIG3Q6UXM1 1119 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 C4orf22Q6V702 233 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 Q71RC1 249 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 PRIMA1Q86XR5 153 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 FBXW8Q8N3Y1 598 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 GOLM1Q8NBJ4 401 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 ABHD11Q8NFV4 315 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 NT5CQ8TCD5 201 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 ASB15Q8WXK1 588 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 NANOS1Q8WY41 292 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 ATG4AQ8WYN0 398 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 RNASE6Q93091 150 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 MFSD3Q96ES6 412 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 SNF8Q96H20 258 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 MDFIQ99750 246 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 SH3GL2Q99962 352 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 AARSD1Q9BTE6 412 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 SGPP1Q9BX95 441 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 ATG10Q9H0Y0 220 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
CAPN1-223ENST00000533079 ACAD8Q9UKU7 415 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 SNX24Q9Y343 169 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 LIPGQ9Y5X9 500 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 COMMD10Q9Y6G5 202 aa11.54□□□□□ -0.56
CAPN1-223ENST00000533079 TRBC2A0A5B9 178 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 PINLYPA6NC86 204 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 AVILO75366 819 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 ZFAND5O76080 213 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 CDH1P12830 882 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 TACR1P25103 407 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 MAGEA5P43359 124 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 DCAF7P61962 342 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 OLR1P78380 273 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 BTG2P78543 158 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 CDK16Q00536 496 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 SORDQ00796 357 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 CALCOCO2Q13137 446 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 SNX1Q13596 522 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 SLMAPQ14BN4 828 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 RTL4Q6ZR62 310 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 CENPUQ71F23 418 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 RELL1Q8IUW5 271 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 TMEM251Q8N6I4 163 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 OR4K1Q8NGD4 311 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 FMO2Q99518 471 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 SLC30A3Q99726 388 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 NECTIN3Q9NQS3 549 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 MYOTQ9UBF9 498 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 ZNF223Q9UK11 482 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-223ENST00000533079 SOX13Q9UN79 622 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 SH2B3Q9UQQ2 575 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 DHRS7Q9Y394 339 aa11.53□□□□□ -0.56
CAPN1-223ENST00000533079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-223ENST00000533079 GOLGA8KD6RF30 607 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 TP73O15350 636 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 ARHGEF9O43307 516 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 OR1F1O43749 312 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 OR2J2O76002 312 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 KRT14P02533 472 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 C8GP07360 202 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 ZNF888P0CJ79 500 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-223ENST00000533079 CNR1P21554 472 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 AHRP35869 848 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 NR0B1P51843 470 aaKnown RBP11.52□□□□□ -0.57
CAPN1-223ENST00000533079 PLTPP55058 493 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 PCBP2Q15366 365 aaKnown RBP eCLIP11.52□□□□□ -0.575e-6■□□□□ 9
CAPN1-223ENST00000533079 PHKG1Q16816 387 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 HECTD2Q5U5R9 776 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 AGTRAPQ6RW13 159 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 CYHR1Q6ZMK1 362 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 KIF18BQ86Y91 864 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 KRTAP1-3Q8IUG1 177 aa11.52□□□□□ -0.57
CAPN1-223ENST00000533079 GSPT2Q8IYD1 628 aaKnown RBP11.52□□□□□ -0.57
CAPN1-223ENST00000533079 RELL2Q8NC24 303 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-223ENST00000533079 SIMC1Q8NDZ2 872 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms