RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MUM1Q2TAK8 710 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 PRTGQ2VWP7 1150 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 DEFB134Q4QY38 66 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 ZC3H12BQ5HYM0 836 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 GPR180Q86V85 440 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 PDSS2Q86YH6 399 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 DTWD1Q8N5C7 304 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 RNF148Q8N7C7 305 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 SRFBP1Q8NEF9 429 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 RAB3IPQ96QF0 476 aaPredicted RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC7A8Q9UHI5 535 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 A0A1W2PR48 441 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 PRKRAO75569 313 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 SCELO95171 688 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 C1QCP02747 245 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC6A2P23975 617 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 PTPN6P29350 595 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 KLC1Q07866 573 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 RUNX2Q13950 521 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 TRMT5Q32P41 509 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 GTDC1Q4AE62 458 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 MANEAQ5SRI9 462 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 IKBIPQ70UQ0 350 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 HPS6Q86YV9 775 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 TICAM1Q8IUC6 712 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 CLECL1Q8IZS7 167 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 ZCCHC7Q8N3Z6 543 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 DNAJB14Q8TBM8 379 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 CIDECQ96AQ7 238 aaPredicted RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 ZNF285Q96NJ3 590 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 DUSP26Q9BV47 211 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 CHRNA10Q9GZZ6 450 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 PAIP1Q9H074 479 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 PDE7BQ9NP56 450 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 GID8Q9NWU2 228 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 SOHLH2Q9NX45 425 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 CMTM6Q9NX76 183 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC25A37Q9NYZ2 338 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 C5AR2Q9P296 337 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 TMEM181Q9P2C4 612 aa20.81■□□□□ 0.92
PACSIN3-209ENST00000532457 ZSCAN9O15535 394 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 RPLP0P05388 317 aaKnown RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 MSX2P35548 267 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 HPCAL1P37235 193 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 MLLT3P42568 568 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 ELF3P78545 371 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 SIM1P81133 766 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC9A5Q14940 896 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 PIGGQ5H8A4 983 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 DHDDSQ86SQ9 333 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC15A3Q8IY34 581 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 MAPKAP1Q9BPZ7 522 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 SPRTNQ9H040 489 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 MMADHCQ9H3L0 296 aaPredicted RBP20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 DLL3Q9NYJ7 618 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 KCMF1Q9P0J7 381 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 VAPAQ9P0L0 249 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 FBXW2Q9UKT8 454 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 MAN2B2Q9Y2E5 1009 aa20.8■□□□□ 0.92
PACSIN3-209ENST00000532457 PGRMC2O15173 223 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 SRPX2O60687 465 aaPredicted RBP20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 KCNK5O95279 499 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 GSNP06396 782 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 HOXB9P17482 250 aaPredicted RBP20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 DDCP20711 480 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 MTTPP55157 894 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 TRA2BP62995 288 aaKnown RBP20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 DPY19L1Q2PZI1 675 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 RABL3Q5HYI8 236 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 C18orf63Q68DL7 685 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 NANOGP8Q6NSW7 305 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 TMEM71Q6P5X7 295 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 BNC2Q6ZN30 1099 aaPredicted RBP20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 FBXW8Q8N3Y1 598 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 WDR60Q8WVS4 1066 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 KLHL6Q8WZ60 621 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC41A2Q96JW4 573 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 HOPXQ9BPY8 73 aaPredicted RBP20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 LRRN3Q9H3W5 708 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 NANOGQ9H9S0 305 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 NDE1Q9NXR1 346 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 PLCL2Q9UPR0 1127 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 WBP11Q9Y2W2 641 aaKnown RBP20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 PCDHA9Q9Y5H5 950 aa20.79■□□□□ 0.92
PACSIN3-209ENST00000532457 H3BMH7 237 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 ALOX12P18054 663 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 IL1RNP18510 177 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 TSFMP43897 325 aaKnown RBP20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC7A2P52569 658 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 HSD11B2P80365 405 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 SELPLGQ14242 412 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 CLPPQ16740 277 aaPredicted RBP20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 CCDC157Q569K6 752 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 C6orf10Q5SRN2 563 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 NDUFAF5Q5TEU4 345 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PRSS42Q7Z5A4 293 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 TMEM125Q96AQ2 219 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PPCDCQ96CD2 204 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 CGREF1Q99674 301 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 DPYSL5Q9BPU6 564 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms