RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 LYRM4Q9HD34 91 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 PRDM9Q9NQV7 894 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 GPR83Q9NYM4 423 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
TSPAN4-220ENST00000532375 A0A088AWK7 358 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 A0A0A6YYD5 115 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 MANBAO00462 879 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 SUV39H1O43463 412 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 TMPRSS11DO60235 418 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 SEMA3DO95025 777 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 PDYNP01213 254 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 SERPINA7P05543 415 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 PRR35P0CG20 571 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 ZNF10P21506 573 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 JAK1P23458 1154 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 ETV4P43268 484 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 CD97P48960 835 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 PGDP52209 483 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 FOXA1P55317 472 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 TBL3Q12788 808 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 LCP2Q13094 533 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 SFT2D3Q587I9 215 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 ATG14Q6ZNE5 492 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 FRMD7Q6ZUT3 714 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 C10orf107Q8IVU9 208 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 RBMXL3Q8N7X1 1067 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 CDYL2Q8N8U2 506 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 NFAM1Q8NET5 270 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 OR6Y1Q8NGX8 325 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 PPP4R1Q8TF05 950 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 METTL21AQ8WXB1 218 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 MAGEB10Q96LZ2 347 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 SERPINI1Q99574 410 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 TUBB6Q9BUF5 446 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 ROGDIQ9GZN7 287 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 LHPPQ9H008 270 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 RIC8BQ9NVN3 520 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 C5AR2Q9P296 337 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 MMACHCQ9Y4U1 282 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 ZNF462Q96JM2 2506 aa13.08□□□□□ -0.32
TSPAN4-220ENST00000532375 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 CTNSO60931 367 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ESRRBO95718 433 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 MLYCDO95822 493 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ITGAMP11215 1152 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 CHN1P15882 459 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ALDH3A1P30838 453 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 SOX11P35716 441 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 HTR6P50406 440 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 PKNOX1P55347 436 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 HSD17B7P56937 341 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 NAA20P61599 178 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 GALNT1Q10472 559 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 MPP2Q14168 576 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 SGO1Q5FBB7 561 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 CEP85LQ5SZL2 805 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 LIPMQ5VYY2 423 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 H3F3CQ6NXT2 135 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 LRIG3Q6UXM1 1119 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 KBTBD2Q8IY47 623 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ZNF595Q8IYB9 648 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 CCNYL1Q8N7R7 359 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 FAM47BQ8NA70 645 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 UCN3Q969E3 161 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ANKRD9Q96BM1 317 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ZBTB9Q96C00 473 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 THOC3Q96J01 351 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 FAM111AQ96PZ2 611 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 KCNA7Q96RP8 456 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 SLC29A3Q9BZD2 475 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 COPS7BQ9H9Q2 264 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 BRF2Q9HAW0 419 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 PRTFDC1Q9NRG1 225 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 C19orf25Q9UFG5 118 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 ATG4BQ9Y4P1 393 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 TIMM22Q9Y584 194 aa13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 SPENQ96T58 3664 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-220ENST00000532375 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 A0A1W2PR48 441 aa13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 CTIFO43310 598 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 PROM1O43490 865 aa13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 TRIM13O60858 407 aa13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 ITGA3P26006 1051 aa13.06□□□□□ -0.32
TSPAN4-220ENST00000532375 TPP2P29144 1249 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms