RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ZDHHC21Q8IVQ6 265 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZZZ3Q8IYH5 903 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 C8orf59Q8N0T1 100 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZNF786Q8N393 782 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 SYNPOQ8N3V7 929 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 C12orf76Q8N812 135 aaPredicted RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZNF366Q8N895 744 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ARL10Q8N8L6 244 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 DENND6BQ8NEG7 585 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 OR7A2PQ8NGA2 310 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 OR4K1Q8NGD4 311 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 OR52N2Q8NGI0 321 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 OR2T29Q8NH02 315 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CLHC1Q8NHS4 586 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 FBXO30Q8TB52 745 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZFP90Q8TF47 636 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CYGBQ8WWM9 190 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 LZICQ8WZA0 190 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZNF566Q969W8 418 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PPCDCQ96CD2 204 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 NECTIN4Q96NY8 510 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 ZNF347Q96SE7 839 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 EPYCQ99645 322 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 GABRG3Q99928 467 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 BCL7BQ9BQE9 202 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TRMT61BQ9BVS5 477 aaKnown RBP5.32□□□□□ -1.56
PCF11-205ENST00000530906 ING2Q9H160 280 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CHST8Q9H2A9 424 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 IKZF5Q9H5V7 419 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CAAP1Q9H8G2 361 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TPT1P8Q9HAU6 139 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TRPV5Q9NQA5 729 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 TAS2R7Q9NYW3 318 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 EHD3Q9NZN3 535 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 FAM8A1Q9UBU6 413 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PADI2Q9Y2J8 665 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 SNX11Q9Y5W9 270 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 AK5Q9Y6K8 562 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CENPFP49454 3210 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 CEP350Q5VT06 3117 aa5.32□□□□□ -1.56
PCF11-205ENST00000530906 PCNTO95613 3336 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 IGLON5A6NGN9 336 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 OTOL1A6NHN0 477 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 EIF4E1BA6NMX2 242 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 GABRR3A8MPY1 467 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 K7ESM1 405 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PDLIM1O00151 329 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SUV39H1O43463 412 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PLRG1O43660 514 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 NOL3O60936 208 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 CLEC3AO75596 197 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PCDH8O95206 1070 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 LRATO95237 230 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PGM3O95394 542 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SNAP29O95721 258 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 CPNE6O95741 557 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 FABP3P05413 133 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 LAMP1P11279 417 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 LAMP2P13473 410 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ATP6V1B1P15313 513 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 NTSR1P30989 418 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 NTF4P34130 210 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 GRK3P35626 688 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 DCTP40126 519 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ANXA11P50995 505 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 RAB28P51157 221 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 NUP107P57740 925 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 KIAA1024LP59773 190 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 CXCR4P61073 352 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 YBX1P67809 324 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 TEKQ02763 1124 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 LSAMPQ13449 338 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 NFE2L1Q14494 772 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 HEPACAMQ14CZ8 416 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 MLC1Q15049 377 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 RGNQ15493 299 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 WSCD2Q2TBF2 565 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 POM121L1PQ3SYA9 428 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 GTDC1Q4AE62 458 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 CCSMST1Q4G0I0 132 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 GCNT6Q5T4J0 391 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 DEPDC1Q5TB30 811 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 BROXQ5VW32 411 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 KHDRBS2Q5VWX1 349 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 FAM219BQ5XKK7 198 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 EGFLAMQ63HQ2 1017 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ZNF773Q6PK81 442 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 CRTC3Q6UUV7 619 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ENPP6Q6UWR7 440 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 WASH2PQ6VEQ5 465 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 RBM44Q6ZP01 1051 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 FAM92BQ6ZTR7 304 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 TMEM26Q6ZUK4 368 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ARMCX6Q7L4S7 300 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 GPR141Q7Z602 305 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SLC9B2Q86UD5 537 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SATL1Q86VE3 508 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 HORMAD1Q86X24 394 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 NUDT13Q86X67 352 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PTOV1Q86YD1 416 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms