RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 SREK1Q8WXA9 508 aaKnown RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 THAP4Q8WY91 577 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 TTC9Q92623 222 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 RGMAQ96B86 450 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 TBC1D20Q96BZ9 403 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 C11orf24Q96F05 449 aaPredicted RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 PEX11GQ96HA9 241 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 FAR2Q96K12 515 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 CATSPER2Q96P56 530 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 IP6K3Q96PC2 410 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 HBEGFQ99075 208 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 MESP1Q9BRJ9 268 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 CENPKQ9BS16 269 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 CRB3Q9BUF7 120 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 SORBS1Q9BX66 1292 aaKnown RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 MRPL1Q9BYD6 325 aaKnown RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 VN1R1Q9GZP7 353 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 SOX17Q9H6I2 414 aaPredicted RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 DDX31Q9H8H2 851 aaKnown RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 COPS7BQ9H9Q2 264 aaPredicted RBP5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 LYRM4Q9HD34 91 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 KCNK9Q9NPC2 374 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 SEMA3GQ9NS98 782 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 WDR70Q9NW82 654 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 KCMF1Q9P0J7 381 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 HAO1Q9UJM8 370 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 C3orf18Q9UK00 162 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 ADAM29Q9UKF5 820 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 POLHQ9Y253 713 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 TIMM22Q9Y584 194 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 CLDN16Q9Y5I7 305 aa5.34□□□□□ -1.55
RPUSD4-204ENST00000530036 SPENQ96T58 3664 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 CNTRLQ7Z7A1 2325 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TCRBV16S1A1N1A0A5B0 115 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 BLACEA4D250 179 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TMEM114B3SHH9 223 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TMEM233B4DJY2 109 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TGFBR3LH3BV60 316 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SAP18O00422 153 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TMPRSS11DO60235 418 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 ALOX12BO75342 701 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 LYPLA1O75608 230 aaPredicted RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SNUPNO95149 360 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 ATXN8OSP0DMR3 200 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 COX6A1P12074 109 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 CHN1P15882 459 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 BGNP21810 368 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 JAK1P23458 1154 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 PRPH2P23942 346 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TPP2P29144 1249 aaPredicted RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SERPINB3P29508 390 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 OTX2P32243 289 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 HNRNPFP52597 415 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 EMP2P54851 167 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 HNRNPH2P55795 449 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 IGLV3-21P80748 117 aaPredicted RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 RHDQ02161 417 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TNFRSF17Q02223 184 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 BST1Q10588 318 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 ATP1A4Q13733 1029 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 CHI3L2Q15782 390 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TBR1Q16650 682 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 AP5B1Q2VPB7 878 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TUBB8Q3ZCM7 444 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SGO1Q5FBB7 561 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 DCAF10Q5QP82 559 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 HHATQ5VTY9 493 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 CLEC6AQ6EIG7 209 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 GALNT18Q6P9A2 607 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 KIRREL2Q6UWL6 708 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 LANCL3Q6ZV70 420 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 COMMD6Q7Z4G1 85 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TRIM46Q7Z4K8 759 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 APLFQ8IW19 511 aaPredicted RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 PRSS58Q8IYP2 241 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 ARFGAP2Q8N6H7 521 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 C1orf52Q8N6N3 182 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 ANKRD42Q8N9B4 389 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TMEM52Q8NDY8 209 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 PLPP5Q8NEB5 264 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 OR11G2Q8NGC1 345 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 FAM76AQ8TAV0 307 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 RAB3IL1Q8TBN0 382 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 CHTF18Q8WVB6 975 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 MTFMTQ96DP5 389 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 METTL2AQ96IZ6 378 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 CSF3RQ99062 836 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SORT1Q99523 831 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 MAPKAP1Q9BPZ7 522 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 YIPF2Q9BWQ6 316 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 RBCK1Q9BYM8 510 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 ACPTQ9BZG2 426 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SHCBP1LQ9BZQ2 653 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 C20orf27Q9GZN8 174 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 TUBB1Q9H4B7 451 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 EML4Q9HC35 981 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 MLXIPLQ9NP71 852 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 LYARQ9NX58 379 aaKnown RBP5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 SIRT5Q9NXA8 310 aa5.33□□□□□ -1.56
RPUSD4-204ENST00000530036 P4HTMQ9NXG6 502 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms