RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 SLC27A4Q6P1M0 643 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 NIPAL3Q6P499 406 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 TRIM65Q6PJ69 517 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 SHC4Q6S5L8 630 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 PCSK4Q6UW60 755 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CEACAM20Q6UY09 585 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 C17orf107Q6ZR85 190 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 FJX1Q86VR8 437 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CBWD2Q8IUF1 395 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 COLGALT1Q8NBJ5 622 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 OR2T12Q8NG77 320 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 OR4C15Q8NGM1 316 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 OR6M1Q8NGM8 313 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CD99L2Q8TCZ2 262 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 FBXO32Q969P5 355 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 PINX1Q96BK5 328 aaKnown RBP3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 NXPE2Q96DL1 559 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 BPIFA2Q96DR5 249 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 IGSF21Q96ID5 467 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 SENP8Q96LD8 212 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 JPH2Q9BR39 696 aaPredicted RBP3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CCDC77Q9BR77 488 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 POLR3CQ9BUI4 534 aaPredicted RBP3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CAPS2Q9BXY5 557 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 GCOM2Q9BZD3 368 aaPredicted RBP3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 ZNF665Q9H7R5 613 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 VIPAS39Q9H9C1 493 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CALHM2Q9HA72 323 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 EXOC1Q9NV70 894 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 HIF1ANQ9NWT6 349 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 RDH8Q9NYR8 311 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 AIPL1Q9NZN9 384 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 OR6C2Q9NZP2 312 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 ERVK-18Q9QC07 812 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 P2RX2Q9UBL9 471 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 LHX3Q9UBR4 397 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 EPHA6Q9UF33 1036 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 BCAP29Q9UHQ4 241 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 FBXL4Q9UKA2 621 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 MRTO4Q9UKD2 239 aaKnown RBP3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CLEC4AQ9UMR7 237 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 C2CD2Q9Y426 696 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 DMRT1Q9Y5R6 373 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 R4GN57 208 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 PARD3Q8TEW0 1356 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 ABCC8Q09428 1581 aa3.21□□□□□ -1.9
AMBRA1-208ENST00000529558 CKAP5Q14008 2032 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 UMODL1Q5DID0 1318 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SOGA1O94964 1423 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 WRNQ14191 1432 aaPredicted RBP eCLIP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 MTMR11A4FU01 709 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 YJEFN3A6XGL0 299 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 A8MUI8 341 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 E9PMD0 336 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SGK494L7N484 410 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 CYR61O00622 381 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SDHDO14521 159 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 MLNRO43193 412 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SYNGR3O43761 229 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 EXTL3O43909 919 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SDC3O75056 442 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 ERLIN1O75477 346 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 MBD3O95983 291 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 GOT2P00505 430 aaKnown RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 UGT2B4P06133 528 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 GZMAP12544 262 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 CDH1P12830 882 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 DARSP14868 501 aaKnown RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 EFNA1P20827 205 aaPredicted RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 CA8P35219 290 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 DLSTP36957 453 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 VCPP55072 806 aaKnown RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 CDH11P55287 796 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 COL10A1Q03692 680 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 MFGE8Q08431 387 aaPredicted RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 KIF5AQ12840 1032 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 COX10Q12887 443 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 ITGA9Q13797 1035 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 RBM39Q14498 530 aaKnown RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 MXD4Q14582 209 aaPredicted RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 MEF2DQ14814 521 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 PDK3Q15120 406 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 OR1C1Q15619 314 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 CCDC57Q2TAC2 916 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 ZNF260Q3ZCT1 412 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 ZNF311Q5JNZ3 666 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 PMF1Q6P1K2 205 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SLC39A4Q6P5W5 647 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 TMEM64Q6YI46 380 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 G2E3Q7L622 706 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 LHFPL4Q7Z7J7 247 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SLC22A16Q86VW1 577 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SLC22A9Q8IVM8 553 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 OR7A2PQ8NGA2 310 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 GOLGA5Q8TBA6 731 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SMG7Q92540 1137 aaKnown RBP3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 OSTF1Q92882 214 aa3.2□□□□□ -1.9
AMBRA1-208ENST00000529558 SLC35C1Q96A29 364 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms