RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 NINJ2Q9NZG7 142 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 ZNF282Q9UDV7 671 aaPredicted RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 NXT1Q9UKK6 140 aaKnown RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CDC14AQ9UNH5 594 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 RRP15Q9Y3B9 282 aaKnown RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 HS3ST3B1Q9Y662 390 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 SCN3AQ9NY46 2000 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 TRBC2A0A5B9 178 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 PABPN1LA6NDY0 278 aaKnown RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 NCF1BA6NI72 391 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 A6NL46 340 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 VGLL3A8MV65 326 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 NCF1CA8MVU1 366 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 H0YIG0 161 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 PEX12O00623 359 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 NSA2O95478 260 aaKnown RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 IGHEP01854 428 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 SLC35E2BP0CK96 405 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 NCF1P14598 390 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 GRK3P35626 688 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 GGT5P36269 586 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 GDF5P43026 501 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 HNMTP50135 292 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 KCNK10P57789 538 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ATP6V0D1P61421 351 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 MAT1AQ00266 395 aaKnown RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 OCA2Q04671 838 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 CSHL1Q14406 222 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 NDUFA9Q16795 377 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 SYT16Q17RD7 645 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ATG9BQ674R7 924 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ZNF324BQ6AW86 544 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 NXPE4Q6UWF7 544 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 PRSS41Q7RTY9 318 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 CCDC91Q7Z6B0 441 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ASPGQ86U10 573 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ISCA2Q86U28 154 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 TMEM200AQ86VY9 491 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 PDSS2Q86YH6 399 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 GALNT16Q8N428 558 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 CAMKVQ8NCB2 501 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 OR11G2Q8NGC1 345 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 OR9A4Q8NGU2 314 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 MIEF2Q96C03 454 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 TSNARE1Q96NA8 513 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 EGFL8Q99944 293 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 TMEM79Q9BSE2 394 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 CDC42EP4Q9H3Q1 356 aaKnown RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ACSS3Q9H6R3 686 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ZNF552Q9H707 407 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-212ENST00000528930 PELI2Q9HAT8 420 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 TRPC4Q9UBN4 977 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 ZANQ9Y493 2812 aa7.97□□□□□ -1.13
SSBP3-212ENST00000528930 TRGV8A0A0C4DH27 118 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 A0A1W2PQ72 361 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 SGK494L7N484 410 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PRPF4O43172 522 aaKnown RBP eCLIP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PROM1O43490 865 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 OR1F1O43749 312 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PRAMEF4O60810 478 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 ALOX12BO75342 701 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 BMP10O95393 424 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 C2P06681 752 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 SMIM10L1P0DMW3 83 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 IL1RNP18510 177 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 CRABP2P29373 138 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 AVPR1BP47901 424 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PPP2R2BQ00005 443 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 REEP5Q00765 189 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 HYAL2Q12891 473 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PWP1Q13610 501 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 RAPSNQ13702 412 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 BMPR2Q13873 1038 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 MYBPC3Q14896 1274 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 FBXO48Q5FWF7 155 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 CDKL4Q5MAI5 379 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PRAMEF9Q5VWM5 478 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 FRA10AC1Q70Z53 315 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 GPSM1Q86YR5 675 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 ZC3H7AQ8IWR0 971 aaKnown RBP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PRSS58Q8IYP2 241 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 CENPLQ8N0S6 344 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 AFAP1L2Q8N4X5 818 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 ANKRD53Q8N9V6 530 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PDPRQ8NCN5 879 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 NT5CQ8TCD5 201 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 IFT81Q8WYA0 676 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 KIAA1191Q96A73 305 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 ESAMQ96AP7 390 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 C8orf44Q96CB5 159 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 MRRFQ96E11 262 aaKnown RBP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 SMIM10Q96HG1 83 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 COX4I2Q96KJ9 171 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 ATOH8Q96SQ7 321 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 CYTH2Q99418 400 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 FMO2Q99518 471 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 CRB3Q9BUF7 120 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PARD6BQ9BYG5 372 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 AICDAQ9GZX7 198 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms