RNA–Protein interactions for RNA: ENST00000528588.5

VPS51-206, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-206ENST00000528588 RFC3P40938 356 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 MEOX1P50221 254 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 IST1P53990 364 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 STXBP1P61764 594 aaKnown RBP18.52■□□□□ 0.56
VPS51-206ENST00000528588 ZKSCAN8Q15776 578 aaPredicted RBP18.52■□□□□ 0.56
VPS51-206ENST00000528588 TOR1AIP1Q5JTV8 583 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 CES4AQ5XG92 561 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 TMIGD1Q6UXZ0 262 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.52■□□□□ 0.56
VPS51-206ENST00000528588 CA13Q8N1Q1 262 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 RND1Q92730 232 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 UBXN10Q96LJ8 280 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 TMEM79Q9BSE2 394 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 EHD1Q9H4M9 534 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 TRIM45Q9H8W5 580 aaPredicted RBP18.52■□□□□ 0.56
VPS51-206ENST00000528588 PRDM9Q9NQV7 894 aa18.52■□□□□ 0.56
VPS51-206ENST00000528588 KLF13Q9Y2Y9 288 aaPredicted RBP18.52■□□□□ 0.56
VPS51-206ENST00000528588 AKAP6Q13023 2319 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 FAM221AA4D161 298 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 LRIT2A6NDA9 550 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 PHGDHO43175 533 aaKnown RBP18.51■□□□□ 0.55
VPS51-206ENST00000528588 CCDC166P0CW27 439 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 CD1DP15813 335 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 GP5P40197 560 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 HLCSP50747 726 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 MLF1P58340 268 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 GPX6P59796 221 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 ATP6V0D1P61421 351 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 SLBPQ14493 270 aaKnown RBP eCLIP18.51■□□□□ 0.55
VPS51-206ENST00000528588 C3orf62Q6ZUJ4 267 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 GPSM1Q86YR5 675 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 TGIF2LYQ8IUE0 185 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 MMP21Q8N119 569 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 ARMC10Q8N2F6 343 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 SPATA6LQ8N4H0 392 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 NFAM1Q8NET5 270 aaPredicted RBP18.51■□□□□ 0.55
VPS51-206ENST00000528588 GAL3ST3Q96A11 431 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 MS4A6EQ96DS6 147 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 NPLQ9BXD5 320 aaPredicted RBP18.51■□□□□ 0.55
VPS51-206ENST00000528588 TP63Q9H3D4 680 aaPredicted RBP18.51■□□□□ 0.55
VPS51-206ENST00000528588 TXNDC16Q9P2K2 825 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 DNAJC13O75165 2243 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 ABCA4P78363 2273 aa18.51■□□□□ 0.55
VPS51-206ENST00000528588 ZNF407Q9C0G0 2248 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 SAGE2PA6NJ88 616 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 KLRC4-KLRK1H3BQV0 150 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 PSMD12O00232 456 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 HS6ST1O60243 411 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 PRAMEF4O60810 478 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 CLEC3AO75596 197 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 ZWINTO95229 277 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 TBX6O95947 436 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 HOXD4P09016 255 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 STMN1P16949 149 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 TFEBP19484 476 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 MAOAP21397 527 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 TRHRP34981 398 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 MYBPHQ13203 477 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 OR4D1Q15615 310 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 ADPRMQ3LIE5 342 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 CMPK2Q5EBM0 449 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 PRAMEF9Q5VWM5 478 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 SULT1C3Q6IMI6 304 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 CCDC71Q8IV32 467 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 SULF2Q8IWU5 870 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 CYP4X1Q8N118 509 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 KRT78Q8N1N4 520 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 CHDHQ8NE62 594 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 WDR34Q96EX3 536 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 FOXC2Q99958 501 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 CNOT10Q9H9A5 744 aaKnown RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 NECTIN3Q9NQS3 549 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 DNAJC11Q9NVH1 559 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 MMACHCQ9Y4U1 282 aa18.5■□□□□ 0.55
VPS51-206ENST00000528588 ZNF469Q96JG9 3925 aaPredicted RBP18.5■□□□□ 0.55
VPS51-206ENST00000528588 NCF1BA6NI72 391 aaPredicted RBP18.49■□□□□ 0.55
VPS51-206ENST00000528588 NCF1CA8MVU1 366 aaPredicted RBP18.49■□□□□ 0.55
VPS51-206ENST00000528588 NCF1P14598 390 aaPredicted RBP18.49■□□□□ 0.55
VPS51-206ENST00000528588 HNRNPH1P31943 449 aaKnown RBP18.49■□□□□ 0.55
VPS51-206ENST00000528588 BTN3A2P78410 334 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 CAV1Q03135 178 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 C2orf54Q08AI8 447 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 RUNX2Q13950 521 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 VN1R5Q7Z5H4 357 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 SCUBE1Q8IWY4 988 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 RPRMLQ8N4K4 120 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 PDPRQ8NCN5 879 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 ARMC2Q8NEN0 867 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 KIAA1191Q96A73 305 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 QRFPRQ96P65 431 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 CXXC4Q9H2H0 198 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 WWOXQ9NZC7 414 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 PTBP2Q9UKA9 531 aaKnown RBP18.49■□□□□ 0.55
VPS51-206ENST00000528588 CLDN16Q9Y5I7 305 aa18.49■□□□□ 0.55
VPS51-206ENST00000528588 FCHO1O14526 889 aa18.48■□□□□ 0.55
VPS51-206ENST00000528588 PEX1O43933 1283 aa18.48■□□□□ 0.55
VPS51-206ENST00000528588 STK16O75716 305 aa18.48■□□□□ 0.55
VPS51-206ENST00000528588 PDE9AO76083 593 aa18.48■□□□□ 0.55
VPS51-206ENST00000528588 KLK2P20151 261 aa18.48■□□□□ 0.55
VPS51-206ENST00000528588 SPRP35270 261 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms