RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 IL17FQ96PD4 163 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 TTLL2Q9BWV7 592 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PPIL3Q9H2H8 161 aaKnown RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 SEMA3GQ9NS98 782 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 NLE1Q9NVX2 485 aaPredicted RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF222Q9UK12 451 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 RWDD3Q9Y3V2 267 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 CLCA1A8K7I4 914 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PRR23D1E9PI22 279 aaPredicted RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 UGT2B17O75795 530 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 POP4O95707 220 aaKnown RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 SLC35G4P0C7Q5 338 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PRR23D2P0DMB1 279 aaPredicted RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ETV3P41162 512 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 RAB14P61106 215 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 TAGLNQ01995 201 aaKnown RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 TATDN3Q17R31 274 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 GPR149Q86SP6 731 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 C17orf64Q86WR6 236 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 CHAC2Q8WUX2 184 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 TBX5Q99593 518 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 H3BUI4 141 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ARHGAP33O14559 1287 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 WBP4O75554 376 aaKnown RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PDYNP01213 254 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 RETP07949 1114 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 WSCD2Q2TBF2 565 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 RFLNAQ6ZTI6 216 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 RNF44Q7L0R7 432 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 CCDC190Q86UF4 302 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 NLRP8Q86W28 1048 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PLCZ1Q86YW0 608 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 GALNT11Q8NCW6 608 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 KCNJ9Q92806 393 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ISG20Q96AZ6 181 aaKnown RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 CCDC115Q96NT0 180 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 INPP5KQ9BT40 448 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 MS4A12Q9NXJ0 267 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 C5AR2Q9P296 337 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ENTPD4Q9Y227 616 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 SNAPC1Q16533 368 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 SLC51BQ86UW2 128 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ZZZ3Q8IYH5 903 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 KREMEN2Q8NCW0 462 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF461Q8TAF7 563 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 FOXJ1Q92949 421 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 RAD51AP1Q96B01 352 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 HSH2DQ96JZ2 352 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 OR5M11Q96RB7 305 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 NLKQ9UBE8 527 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 SPATA2Q9UM82 520 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ARNTLO00327 626 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 CDK1P06493 297 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 CLTBP09497 229 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 C8orf89P0DMQ9 161 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 CKMT1AP12532 417 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 RPS5P46782 204 aaKnown RBP17.17■□□□□ 0.34
LTBP3-210ENST00000528516 RFX2P48378 723 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 SUZ12Q15022 739 aaKnown RBP17.17■□□□□ 0.34
LTBP3-210ENST00000528516 LCN1P1Q5VSP4 162 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 FAM129CQ86XR2 697 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 PGBD5Q8N414 524 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 CAPNS2Q96L46 248 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 CCDC3Q9BQI4 270 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 MAGIXQ9H6Y5 334 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 SPTBN2O15020 2390 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF840PA6NDX5 716 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 KDELR3O43731 214 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 PSMA1P25786 263 aaKnown RBP17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ADRA1AP35348 466 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 HOXC5Q00444 222 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 NOGQ13253 232 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 KRT74Q7RTS7 529 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF419Q96HQ0 510 aaPredicted RBP17.17■□□□□ 0.34
LTBP3-210ENST00000528516 MCUBQ9NWR8 336 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 NDRG4Q9ULP0 352 aaKnown RBP17.17■□□□□ 0.34
LTBP3-210ENST00000528516 DHRS7Q9Y394 339 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 ASB1Q9Y576 335 aa17.17■□□□□ 0.34
LTBP3-210ENST00000528516 RPS17P08708 135 aaKnown RBP17.16■□□□□ 0.34
LTBP3-210ENST00000528516 ZFP36L2P47974 494 aaKnown RBP17.16■□□□□ 0.34
LTBP3-210ENST00000528516 RPS13P62277 151 aaKnown RBP17.16■□□□□ 0.34
LTBP3-210ENST00000528516 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.16■□□□□ 0.34
LTBP3-210ENST00000528516 SEMA3BQ13214 749 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 MAB21L1Q13394 359 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 IRF3Q14653 427 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 LY6G5CQ5SRR4 150 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 KDM4DQ6B0I6 523 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 MZT2BQ6NZ67 158 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 LGI4Q8N135 537 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 C17orf62Q9BQA9 187 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D17Q9HA65 648 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 PTGFRNQ9P2B2 879 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 H3BSH0 61 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 XKR7Q5GH72 579 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 MED27Q6P2C8 311 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 POMZP3Q6PJE2 187 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 GALNT7Q86SF2 657 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 TMEM173Q86WV6 379 aaPredicted RBP17.16■□□□□ 0.34
LTBP3-210ENST00000528516 KRT78Q8N1N4 520 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms