RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MMP25Q9NPA2 562 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 NECTIN3Q9NQS3 549 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 LANCL2Q9NS86 450 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 TMCO1Q9UM00 188 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 ERVK-11Q9UQG0 969 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 OSGIN2Q9Y236 505 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 ASB1Q9Y576 335 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 CLCA3PQ9Y6N3 262 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 BOD1L1Q8NFC6 3051 aa8.52□□□□□ -1.05
CMTM1-210ENST00000528441 C4orf51C9J302 202 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 RNF223E7ERA6 249 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 SIX3O95343 332 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 WISP3O95389 354 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 SNRPAP09012 282 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 SOX11P35716 441 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 BUD31P41223 144 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 EFNA3P52797 238 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 LIM2P55344 173 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 PER3P56645 1201 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 RPS13P62277 151 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 ID2Q02363 134 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 SRSF11Q05519 484 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 RUNX2Q13950 521 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 OR1C1Q15619 314 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TMEM35AQ53FP2 167 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 SGO1Q5FBB7 561 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TECRLQ5HYJ1 363 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 UBAP2Q5T6F2 1119 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 ABHD17CQ6PCB6 329 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 IGFL2Q6UWQ7 119 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TRMT10CQ7L0Y3 403 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 RPS19BP1Q86WX3 136 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 ZNF595Q8IYB9 648 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 CENPLQ8N0S6 344 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 KIF2BQ8N4N8 673 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 AMER2Q8N7J2 671 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 UBTD2Q8WUN7 234 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 FAR1Q8WVX9 515 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 HAS2Q92819 552 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 RGMAQ96B86 450 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 VMP1Q96GC9 406 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 IMMP1LQ96LU5 166 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 DGAT2Q96PD7 388 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 CSF3RQ99062 836 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TBCDQ9BTW9 1192 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 MS4A8Q9BY19 250 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 OR8D2Q9GZM6 311 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 OR51B5Q9H339 312 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 ELOVL6Q9H5J4 265 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 NOL11Q9H8H0 719 aaKnown RBP8.51□□□□□ -1.05
CMTM1-210ENST00000528441 L2HGDHQ9H9P8 463 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 LRFN1Q9P244 771 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 COPS7AQ9UBW8 275 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TBK1Q9UHD2 729 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 ADGRE2Q9UHX3 823 aa8.51□□□□□ -1.05
CMTM1-210ENST00000528441 TRGV8A0A0C4DH27 118 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SYNDIG1LA6NDD5 238 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 OR10H2O60403 315 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 LDB3O75112 727 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CRCPO75575 148 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CLDN9O95484 217 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 C1QAP02745 245 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ALDOAP04075 364 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 EDN3P14138 238 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CD22P20273 847 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CYB561P49447 251 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 HSD17B7P56937 341 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 PMP22Q01453 160 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ALDH6A1Q02252 535 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SLAMF1Q13291 335 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 TUBA3CQ13748 450 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SERTAD2Q14140 314 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 TBCCQ15814 346 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 INAQ16352 499 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 KHDRBS2Q5VWX1 349 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 LIPJQ5W064 366 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 TUBA3EQ6PEY2 450 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 MILR1Q7Z6M3 343 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CNTRLQ7Z7A1 2325 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 PLD6Q8N2A8 252 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 RNF175Q8N4F7 328 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ACOT4Q8N9L9 421 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ST6GALNAC3Q8NDV1 305 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 B3GNT7Q8NFL0 401 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 MYRIPQ8NFW9 859 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 OR7G3Q8NG95 312 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 HUS1BQ8NHY5 278 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ZNF473Q8WTR7 871 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ASB15Q8WXK1 588 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 PSMF1Q92530 271 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 DAZLQ92904 295 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 NCLNQ969V3 563 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 MAGED4Q96JG8 741 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SORBS1Q9BX66 1292 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms