RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GALNTL5Q7Z4T8 443 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 TBC1D1Q86TI0 1168 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF808Q8N4W9 903 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 CCT6BQ92526 530 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 QRFPRQ96P65 431 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 CCDC77Q9BR77 488 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 CD244Q9BZW8 370 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 AICDAQ9GZX7 198 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 PRTFDC1Q9NRG1 225 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 ANKRD10Q9NXR5 420 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF835Q9Y2P0 537 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 MYO9AB2RTY4 2548 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 LRBAP50851 2863 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 C4orf51C9J302 202 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 KLRC4-KLRK1H3BQV0 150 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 NME2P1O60361 137 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 MAN1A2O60476 641 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 CTNSO60931 367 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 PIAS1O75925 651 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 C1QAP02745 245 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 FAM153BP0C7A2 387 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 TFEBP19484 476 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 AGAP20933 346 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 NME2P22392 152 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 MAGEA4P43358 317 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 KCNC1P48547 511 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 HSPA7P48741 367 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 PLA2G16P53816 162 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 PMP22Q01453 160 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 IRF8Q02556 426 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 SLC13A2Q13183 592 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 DOC2AQ14183 400 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 OR4D1Q15615 310 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 MAPKAPK3Q16644 382 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 FAM153CQ494X1 144 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 TMEM35AQ53FP2 167 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 SP5Q6BEB4 398 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-212ENST00000527887 XKRXQ6PP77 449 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 BNC2Q6ZN30 1099 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-212ENST00000527887 RAPH1Q70E73 1250 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 CROCCP2Q86T23 111 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 TICAM1Q8IUC6 712 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 GPALPP1Q8IXQ4 340 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 CPAMD8Q8IZJ3 1885 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 SPATA6LQ8N4H0 392 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 KIF2BQ8N4N8 673 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 SNX31Q8N9S9 440 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 APCDD1LQ8NCL9 501 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 VMP1Q96GC9 406 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 FRMD6Q96NE9 622 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 KCNC2Q96PR1 638 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 COPS7BQ9H9Q2 264 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-212ENST00000527887 LYRM4Q9HD34 91 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 CHST11Q9NPF2 352 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 ADAP2Q9NPF8 381 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 NUDT4Q9NZJ9 180 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 ADGRE2Q9UHX3 823 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF490Q9ULM2 529 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-212ENST00000527887 DAPP1Q9UN19 280 aa13.26□□□□□ -0.29
CAPN1-212ENST00000527887 KLF13Q9Y2Y9 288 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-212ENST00000527887 SVILO95425 2214 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SCN2AQ99250 2005 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SYCE1LA8MT33 242 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 CYR61O00622 381 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 ASNA1O43681 348 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 CCNT2O60583 730 aaKnown RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 ZFAND5O76080 213 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 MYO1DO94832 1006 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 TBX6O95947 436 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 LTA4HP09960 611 aaKnown RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SMSP52788 366 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 BIKQ13323 160 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SERTAD2Q14140 314 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 ELAVL1Q15717 326 aaKnown RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 ISCA2Q86U28 154 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SPPL2CQ8IUH8 684 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SIAH3Q8IW03 269 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 EID3Q8N140 333 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 GHDCQ8N2G8 530 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 RHEBL1Q8TAI7 183 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 ITLN2Q8WWU7 325 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 DAZLQ92904 295 aaKnown RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 CCDC120Q96HB5 630 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 TBCDQ9BTW9 1192 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 HES7Q9BYE0 225 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 PRDM7Q9NQW5 492 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 FAM53CQ9NYF3 392 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 YARS2Q9Y2Z4 477 aaKnown RBP13.25□□□□□ -0.29
CAPN1-212ENST00000527887 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
CAPN1-212ENST00000527887 TRBV11-1A0A0K0K1C0 115 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms