RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PCTPQ9UKL6 214 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 RNF11Q9Y3C5 154 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 CPAMD8Q8IZJ3 1885 aa24.7■■□□□ 1.54
TSPAN4-217ENST00000527644 SYNDIG1LA6NDD5 238 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 TCP11X1B4DZS4 312 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 OR7A17O14581 309 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 SH3BGRLO75368 114 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 HIST1H1TP22492 207 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 GNLYP22749 145 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 PTX3P26022 381 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 CCNG1P51959 295 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 ARFIP1P53367 373 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 TAS2R50P59544 299 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 SLC13A2Q13183 592 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 MEP1AQ16819 746 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 ACER2Q5QJU3 275 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 SLC5A8Q8N695 610 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 TMEM52Q8NDY8 209 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 ACMSDQ8TDX5 336 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 RGMAQ96B86 450 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 MTERF1Q99551 399 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 NTMT1Q9BV86 223 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.69■■□□□ 1.543e-7■■■■□ 26.3
TSPAN4-217ENST00000527644 AGPAT4Q9NRZ5 378 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 PSD3Q9NYI0 1048 aa24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 FLNBO75369 2602 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-217ENST00000527644 OR5H15A6NDH6 313 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 RTCAO00442 366 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 CTNSO60931 367 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 SBK3P0C264 359 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 SSR2P43308 183 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 UQCRFS1P47985 274 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 HNRNPFP52597 415 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 OR4C11Q6IEV9 310 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 RNF175Q8N4F7 328 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 OR52B6Q8NGF0 335 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 CSF3RQ99062 836 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 ABI3Q9P2A4 366 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 NTNG1Q9Y2I2 539 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 CLDN16Q9Y5I7 305 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 SPACA6W5XKT8 324 aa24.68■■□□□ 1.54
TSPAN4-217ENST00000527644 A8MUA0 341 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 FOXE1O00358 373 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 SAP18O00422 153 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 F10P00742 488 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 RPS17P08708 135 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 ARL1P40616 181 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 RAP1GDS1P52306 607 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 RPS13P62277 151 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 TERF2Q15554 542 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 ZRSR2Q15696 482 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 FCRLBQ6BAA4 426 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 CRLF3Q8IUI8 442 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 LGI4Q8N135 537 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 NFAM1Q8NET5 270 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 WDR20Q8TBZ3 569 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 NSUN5Q96P11 429 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 MAPKAP1Q9BPZ7 522 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 C1QTNF3Q9BXJ4 246 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 ZBTB26Q9HCK0 441 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 TMEM216Q9P0N5 145 aa24.67■■□□□ 1.54
TSPAN4-217ENST00000527644 BLACEA4D250 179 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 CLEC18AA5D8T8 446 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 A8MT66 165 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 TAC1P20366 129 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 CUL3Q13618 768 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 CLEC18BQ6UXF7 455 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 BEST3Q8N1M1 668 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 CLEC18CQ8NCF0 446 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 SUN3Q8TAQ9 357 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 MZB1Q8WU39 189 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 UBLCP1Q8WVY7 318 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 CDK15Q96Q40 435 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 NPAS2Q99743 824 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 PNO1Q9NRX1 252 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 TBK1Q9UHD2 729 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 PPT2Q9UMR5 302 aa24.66■■□□□ 1.54
TSPAN4-217ENST00000527644 ASH1LQ9NR48 2969 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 TGFBR3LH3BV60 316 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 PLPP1O14494 284 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 CDK2AP1O14519 115 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 UBAP2LQ14157 1087 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 INAQ16352 499 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 C10orf62Q5T681 223 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 MILR1Q7Z6M3 343 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 CLNKQ7Z7G1 428 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 ZCCHC7Q8N3Z6 543 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 GRHL3Q8TE85 626 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 ZNF483Q8TF39 744 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 PPCSQ9HAB8 311 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 SEMA4BQ9NPR2 832 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 MS4A12Q9NXJ0 267 aa24.65■■□□□ 1.54
TSPAN4-217ENST00000527644 SETXQ7Z333 2677 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 ESPL1Q14674 2120 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 LRRK2Q5S007 2527 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 MYO1DO94832 1006 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 CBX6O95503 412 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 GSTA1P08263 222 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 PYGBP11216 843 aa24.64■■□□□ 1.54
TSPAN4-217ENST00000527644 CPN2P22792 545 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms