RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ZNF292O60281 2723 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 MN1Q10571 1320 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-203ENST00000527275 TRBV5-3A0A0A0MS03 114 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 HCRTR1O43613 425 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 CPNE6O95741 557 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 SERPIND1P05546 499 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 COX7A2P14406 83 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 AHRP35869 848 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 ASMTP46597 345 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 C21orf58P58505 322 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 SQSTM1Q13501 440 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 GTDC1Q4AE62 458 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 GLYATQ6IB77 296 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 MFSD9Q8NBP5 474 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 CATSPER1Q8NEC5 780 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 TTLQ8NG68 377 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 CREB3L4Q8TEY5 395 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 PHOX2BQ99453 314 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 LRRN3Q9H3W5 708 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 IKZF5Q9H5V7 419 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 SLC6A13Q9NSD5 602 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 AURKCQ9UQB9 309 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 AP1M2Q9Y6Q5 423 aa17.86■□□□□ 0.45
SMPD1-203ENST00000527275 SAP18O00422 153 aaKnown RBP17.85■□□□□ 0.45
SMPD1-203ENST00000527275 B3GALT4O96024 378 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 CAPNS1P04632 268 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 IL10P22301 178 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 PSMA4P25789 261 aaKnown RBP17.85■□□□□ 0.45
SMPD1-203ENST00000527275 TIA1P31483 386 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMPD1-203ENST00000527275 AQP4P55087 323 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 PHEXP78562 749 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 RELAQ04206 551 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 FRMPD2BQ6IN97 320 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 GALNT18Q6P9A2 607 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 ZNF574Q6ZN55 896 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-203ENST00000527275 VN1R4Q7Z5H5 301 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 TMEM132CQ8N3T6 1108 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 OR10A6Q8NH74 314 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 STARD8Q92502 1023 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 GBP5Q96PP8 586 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 REXO4Q9GZR2 422 aaKnown RBP17.85■□□□□ 0.45
SMPD1-203ENST00000527275 SYNDIG1Q9H7V2 258 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 SIRT5Q9NXA8 310 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 AP3M1Q9Y2T2 418 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 SPTBP11277 2137 aa17.85■□□□□ 0.45
SMPD1-203ENST00000527275 LOC105369274A0A096LPK9 316 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 LOC102723532A0A0G2JNH3 316 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 GNG14A0A1W2PPG7 69 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 NDUFS4O43181 175 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 PCDH7O60245 1069 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 CBFA2T3O75081 653 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 GSNP06396 782 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 CYP51A1Q16850 503 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TBCELQ5QJ74 424 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TMEM71Q6P5X7 295 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 OR4N4Q8N0Y3 316 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 ICA1LQ8NDH6 482 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 OR8J2Q8NGG1 315 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 PPWD1Q96BP3 646 aaKnown RBP17.84■□□□□ 0.45
SMPD1-203ENST00000527275 MS4A8Q9BY19 250 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 SEMA6AQ9H2E6 1030 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 MAGEL2Q9UJ55 1249 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 DMXL1Q9Y485 3027 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 COL5A1P20908 1838 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-203ENST00000527275 PCNX2A6NKB5 2137 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TCRBV5S2A0A599 114 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 A8MU76 341 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 RFXANKO14593 260 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 CLEC3AO75596 197 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TIPRLO75663 272 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 GPIP06744 558 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 ACP1P24666 158 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 PTX3P26022 381 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-203ENST00000527275 SERPINB1P30740 379 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 SEPHS1P49903 392 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 HKDC1Q2TB90 917 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 DEFB110Q30KQ9 67 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 CROCCQ5TZA2 2017 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 RNF44Q7L0R7 432 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TICAM1Q8IUC6 712 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 ADGRG5Q8IZF4 528 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TRPV3Q8NET8 790 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 OR2T12Q8NG77 320 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 FAM110BQ8TC76 370 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 TCTN2Q96GX1 697 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 F2RL3Q96RI0 385 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 RPF2Q9H7B2 306 aaKnown RBP17.84■□□□□ 0.45
SMPD1-203ENST00000527275 SOHLH2Q9NX45 425 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 MAPRE3Q9UPY8 281 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 FAM186AA6NE01 2351 aa17.84■□□□□ 0.45
SMPD1-203ENST00000527275 GVINP1Q7Z2Y8 2422 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 LRIT2A6NDA9 550 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 PROB1E7EW31 1015 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 HNRNPRO43390 633 aaKnown RBP17.83■□□□□ 0.45
SMPD1-203ENST00000527275 ZBTB11O95625 1053 aaPredicted RBP17.83■□□□□ 0.45
SMPD1-203ENST00000527275 UMPSP11172 480 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 GSTM2P28161 218 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 PTPN6P29350 595 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 CDKN2CP42773 168 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 WNT3P56703 355 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms