RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 NSDHLQ15738 373 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 MAPK14Q16539 360 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 PPP1R3BQ86XI6 285 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 SLC6A18Q96N87 628 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 HIST1H2AAQ96QV6 131 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 POT1Q9NUX5 634 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 IL17CQ9P0M4 197 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 AK4P27144 223 aaPredicted RBP16.37■□□□□ 0.21
BEST1-203ENST00000524877 FOLH1Q04609 750 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 SMCO1Q147U7 214 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 SNAPC1Q16533 368 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 KDELC1Q6UW63 502 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 HIPK1Q86Z02 1210 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 OR52E4Q8NGH9 312 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 OR5AR1Q8NGP9 310 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 TMEM234Q8WY98 164 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 PEX11GQ96HA9 241 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 PTRH2Q9Y3E5 179 aaKnown RBP16.37■□□□□ 0.21
BEST1-203ENST00000524877 GLOD5A6NK44 160 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 NPIPA5E9PKD4 350 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 TNFRSF10BO14763 440 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 IL4RP24394 825 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 ACADLP28330 430 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 RCVRNP35243 200 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 MC1RQ01726 317 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 TMEM31Q5JXX7 168 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 ARHGAP12Q8IWW6 846 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 LRRC25Q8N386 305 aaPredicted RBP16.37■□□□□ 0.21
BEST1-203ENST00000524877 PDPRQ8NCN5 879 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 NEK7Q8TDX7 302 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 CDC6Q99741 560 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 FOXQ1Q9C009 403 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 LTB4R2Q9NPC1 389 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 PNPLA3Q9NST1 481 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 NPIPA1Q9UND3 350 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 IRAK3Q9Y616 596 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 A0A1B0GVT2 93 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 H7C2Y5 167 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 I3L521 148 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 UGT2B11O75310 529 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 RPLP0P05388 317 aaKnown RBP16.37■□□□□ 0.21
BEST1-203ENST00000524877 ENGP17813 658 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 RORAP35398 523 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 TPMTP51580 245 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 CARTPTQ16568 116 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 DEFB110Q30KQ9 67 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 ATCAYQ86WG3 371 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 PIH1D2Q8WWB5 315 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 LPGAT1Q92604 370 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 F3P13726 295 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 AGTR2P50052 363 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 RSPO2Q6UXX9 243 aaPredicted RBP16.36■□□□□ 0.21
BEST1-203ENST00000524877 CRB3Q9BUF7 120 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 C14orf105Q9NVL8 296 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 PTGFRNQ9P2B2 879 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 METTL21EPA6NDL7 271 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 SOX30O94993 753 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 BCHEP06276 602 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 LYNP07948 512 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 ITIH1P19827 911 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 TIMM50Q3ZCQ8 353 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 GALNT12Q8IXK2 581 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 CCDC115Q96NT0 180 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 SERINC2Q96SA4 455 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 BHMG1C9JSJ3 638 aaPredicted RBP16.36■□□□□ 0.21
BEST1-203ENST00000524877 SDHBP21912 280 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 ZIK1Q3SY52 487 aaPredicted RBP16.36■□□□□ 0.21
BEST1-203ENST00000524877 SPAG16Q8N0X2 631 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 THAP3Q8WTV1 239 aaPredicted RBP16.36■□□□□ 0.21
BEST1-203ENST00000524877 RELTQ969Z4 430 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 COL21A1Q96P44 957 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 RPF2Q9H7B2 306 aaKnown RBP16.36■□□□□ 0.21
BEST1-203ENST00000524877 STAT5AP42229 794 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 SGSHP51688 502 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 ARSDP51689 593 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.21
BEST1-203ENST00000524877 RANBP10Q6VN20 620 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 SLC22A15Q8IZD6 547 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 AP1M2Q9Y6Q5 423 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 SAGE2PA6NJ88 616 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 OR52A4PA6NMU1 304 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 C1SP09871 688 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 TMEM52BQ4KMG9 183 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 OR52E1Q8NGJ3 308 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 TOR3AQ9H497 397 aa16.36■□□□□ 0.21
BEST1-203ENST00000524877 OAS3Q9Y6K5 1087 aaKnown RBP16.36■□□□□ 0.21
BEST1-203ENST00000524877 SERPINA1P01009 418 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 DRD2P14416 443 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 MSR1P21757 451 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 CDKN2DP55273 166 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 ARG2P78540 354 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 TMEM198Q66K66 360 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 TLDC1Q6P9B6 456 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 IGDCC3Q8IVU1 814 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 SLC44A3Q8N4M1 653 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 FBXL8Q96CD0 374 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 RTP4Q96DX8 246 aa16.35■□□□□ 0.21
BEST1-203ENST00000524877 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms