RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 LHCGRP22888 699 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MSNP26038 577 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 IVDP26440 423 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CHRNA3P32297 505 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ACSL1P33121 698 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CA5AP35218 305 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RPL22P35268 128 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ADRA1AP35348 466 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 P2RY2P41231 377 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CD86P42081 329 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PSMD8P48556 350 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CSNK1DP48730 415 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TPMTP51580 245 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 NEK3P51956 506 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TERF1P54274 439 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PNLIPRP1P54315 467 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RHOAP61586 193 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SNRPD1P62314 119 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF33AQ06730 810 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SLC20A2Q08357 652 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ACSM2AQ08AH3 577 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CNTN1Q12860 1018 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RALGDSQ12967 914 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MYBPHQ13203 477 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 BYSLQ13895 437 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF235Q14590 738 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RFTN1Q14699 578 aaPredicted RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PTPRCAPQ14761 206 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PDK1Q15118 436 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ANGPT1Q15389 498 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CST6Q15828 149 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CDKN3Q16667 212 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PFKFB4Q16877 469 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MYLK3Q32MK0 819 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ACCSLQ4AC99 568 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ODF2Q5BJF6 829 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CARD16Q5EG05 197 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 EOGTQ5NDL2 527 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PIP5KL1Q5T9C9 394 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MARC1Q5VT66 337 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ANKRD22Q5VYY1 191 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 KCTD11Q693B1 232 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RETSATQ6NUM9 610 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 GDPD4Q6W3E5 623 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MEX3BQ6ZN04 569 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RFLNAQ6ZTI6 216 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PID1Q7Z2X4 250 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TSPAN33Q86UF1 283 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CDKL3Q8IVW4 592 aaPredicted RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC117Q8IWD4 279 aaPredicted RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 KLHL7Q8IXQ5 586 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SPEM1Q8N4L4 309 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PCDH20Q8N6Y1 951 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF557Q8N988 423 aaPredicted RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF114Q8NC26 417 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 NOA1Q8NC60 698 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SPATA4Q8NEY3 305 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 OR2T3Q8NH03 318 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 RFWD2Q8NHY2 731 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 UCMAQ8WVF2 138 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PIH1D2Q8WWB5 315 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 OR8D1Q8WZ84 308 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 MAGOHBQ96A72 148 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 IMP4Q96G21 291 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SPATA13Q96N96 652 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 NUDCD1Q96RS6 583 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 KRT12Q99456 494 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SEMA3CQ99985 751 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CARD6Q9BX69 1037 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 POLR1EQ9GZS1 481 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SLC25A51Q9H1U9 297 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 GBA3Q9H227 469 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 NEUROG2Q9H2A3 272 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CLK4Q9HAZ1 481 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SEPSECSQ9HD40 501 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 WSB2Q9NYS7 404 aaPredicted RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 IL36AQ9UHA7 158 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PCYOX1Q9UHG3 505 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 AMACRQ9UHK6 382 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 HPCAL4Q9UM19 191 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PLA2G4CQ9UP65 541 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 DHDHQ9UQ10 334 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF148Q9UQR1 794 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 CHKBQ9Y259 395 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 TTLL3Q9Y4R7 772 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 NFS1Q9Y697 457 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 PTPRBP23467 1997 aa2.87□□□□□ -1.95
CSDE1-208ENST00000524652 GOLGA4Q13439 2230 aaKnown RBP2.87□□□□□ -1.95
CSDE1-208ENST00000524652 SAA2-SAA4A0A096LPE2 208 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 A0A0J9YYE9 177 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 LOC285095A0A1B0GVY8 99 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 NPIPB15A6NHN6 443 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 FAM90A20PA6NIJ5 464 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 C17orf100A8MU93 164 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 A8MX80 341 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KPNA3O00505 521 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 GAPDHSO14556 408 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 DNALI1O14645 258 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ALOX15BO15296 676 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TIMM44O43615 452 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms