RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 ASB11Q8WXH4 323 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 TMEM158Q8WZ71 300 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 KIAA1191Q96A73 305 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 PERPQ96FX8 193 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CALR3Q96L12 384 aaKnown RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 SGCZQ96LD1 299 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 JSRP1Q96MG2 331 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CCL19Q99731 98 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 HAUS8Q9BT25 410 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 AARSD1Q9BTE6 412 aaKnown RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 IL22Q9GZX6 179 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 EPB41L4BQ9H329 900 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CLK4Q9HAZ1 481 aaKnown RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 ADAP2Q9NPF8 381 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 PRTFDC1Q9NRG1 225 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 GALPQ9UBC7 116 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 SPRR3Q9UBC9 169 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 MRPS33Q9Y291 106 aaKnown RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 PCDHGB3Q9Y5G1 929 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 IGKV3D-11A0A0A0MRZ8 115 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TRIM64A6NGJ6 449 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TRIM64BA6NI03 449 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 AHRRA9YTQ3 701 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 ERN1O75460 977 aaKnown RBP8.6□□□□□ -1.03
PTPN12-216ENST00000523952 CRLF1O75462 422 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 EPPINO95925 133 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 HRGP04196 525 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 HIST1H2AGP0C0S8 130 aaPredicted RBP8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TNNI3P19429 210 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 HIST1H2ADP20671 130 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 OGNP20774 298 aaKnown RBP8.6□□□□□ -1.03
PTPN12-216ENST00000523952 FPR1P21462 350 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 SAT1P21673 171 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 OPRM1P35372 400 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 SKIV2L2P42285 1042 aaKnown RBP8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TRPC1P48995 793 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 NPY2RP49146 381 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 GPR143P51810 404 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 ADARP55265 1226 aaKnown RBP8.6□□□□□ -1.03
PTPN12-216ENST00000523952 NAE1Q13564 534 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 XKR6Q5GH73 641 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 AGTRAPQ6RW13 159 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 LCTLQ6UWM7 567 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 PRSS57Q6UWY2 283 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TC2NQ8N9U0 490 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 NAXEQ8NCW5 288 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 SMPDL3BQ92485 455 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 DAZLQ92904 295 aaKnown RBP8.6□□□□□ -1.03
PTPN12-216ENST00000523952 SCYL1Q96KG9 808 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 HIST1H2AHQ96KK5 128 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 PIP5K1AQ99755 562 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 HIST1H2AJQ99878 128 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 H2AFJQ9BTM1 129 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 UBTD1Q9HAC8 227 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TREX1Q9NSU2 369 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 NDRG3Q9UGV2 375 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TFR2Q9UP52 801 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 CAMK2AQ9UQM7 478 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 SH2B3Q9UQQ2 575 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 PCDHA13Q9Y5I0 950 aa8.6□□□□□ -1.03
PTPN12-216ENST00000523952 TRBC2A0A5B9 178 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 SYNDIG1LA6NDD5 238 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 GFYI3L273 518 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 NRDCO43847 1150 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 PRKNO60260 465 aaPredicted RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 IPO7O95373 1038 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CTSSP25774 331 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 GDF1P27539 372 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CEACAM8P31997 349 aaPredicted RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 RPL22P35268 128 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 TIMP3P35625 211 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CLCN7P51798 805 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 AGFG1P52594 562 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 HK2P52789 917 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 WNT3P56703 355 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 BASP1P80723 227 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CCZ1BP86790 482 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CCZ1P86791 482 aaPredicted RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 TBL3Q12788 808 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 THOC5Q13769 683 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CSHL1Q14406 222 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 HYAL4Q2M3T9 481 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 ACSF3Q4G176 576 aaPredicted RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 SLC22A10Q63ZE4 541 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 LRRC8EQ6NSJ5 796 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CASC4Q6P4E1 433 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CES3Q6UWW8 571 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 PIWIL4Q7Z3Z4 852 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 PHC2Q8IXK0 858 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 CPNE9Q8IYJ1 553 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 PM20D2Q8IYS1 436 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 TRPV3Q8NET8 790 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 OR5L2Q8NGL0 311 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 NEIL3Q8TAT5 605 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 SLC35B2Q8TB61 432 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 NT5CQ8TCD5 201 aa8.59□□□□□ -1.03
PTPN12-216ENST00000523952 UTP15Q8TED0 518 aaKnown RBP8.59□□□□□ -1.03
PTPN12-216ENST00000523952 ISL2Q96A47 359 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms