RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TENM3Q9P273 2699 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 IGHV5-10-1A0A0J9YXX1 117 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SPTY2D1-AS1A0A0U1RR47 76 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 A0A1B0GWJ7 208 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM90A18PA6NE21 464 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM90A16PA6NEW6 464 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM90A9PA6NNJ1 464 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM90A5PA8MXJ8 464 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZNF879B4DU55 563 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 LMO7DNF2Z398 122 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 GOLGA8SH3BPF8 625 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 PDLIM1O00151 329 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SLC33A1O00400 549 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 BTN3A1O00481 513 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 DNALI1O14645 258 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 MDM4O15151 490 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 DPM1O60762 260 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 CRLF1O75462 422 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SLCO2B1O94956 709 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 NDUFA10O95299 355 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM90A15PP0C7V4 464 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM90A14PP0C7W9 464 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 STAG3L3P0CL85 134 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 CCDC130P13994 396 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 GCFC2P16383 781 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZFXP17010 805 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 IGFBP2P18065 325 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 EPORP19235 508 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 HNRNPA2B1P22626 353 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 MGAT1P26572 445 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 HOXD9P28356 352 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 NUP62P37198 522 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SLC15A1P46059 708 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 PSMD8P48556 350 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ARHGDIBP52566 201 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 LRRC63Q05C16 580 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 PDCLQ13371 301 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 COTL1Q14019 142 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 BOP1Q14137 746 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 GAMTQ14353 236 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZNF235Q14590 738 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 IL11RAQ14626 422 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ARHGAP19Q14CB8 494 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZMYND11Q15326 602 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 IL17AQ16552 155 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 CALCRLQ16602 461 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZNF284Q2VY69 593 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FAM214AQ32MH5 1076 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 GALNTL6Q49A17 601 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 LRRC23Q53EV4 343 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 NCAPH2Q6IBW4 605 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 C8orf74Q6P047 294 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 RAD9BQ6WBX8 426 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 Q6ZSR6 202 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SPATA19Q7Z5L4 167 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SPRED1Q7Z699 444 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 AMZ2Q86W34 360 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 GRAMD2AQ8IUY3 354 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 CCDC28AQ8IWP9 274 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SLC43A2Q8N370 569 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 Q8N9G6 341 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZNF565Q8N9K5 539 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 EIF1ADQ8N9N8 165 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 LPCAT1Q8NF37 534 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FDCSPQ8NFU4 85 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 AKR7LQ8NHP1 331 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SLC35B2Q8TB61 432 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 Q8TCH9 128 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 LMLNQ96KR4 655 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 C7orf34Q96L11 122 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 CCDC42Q96M95 316 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 MED15Q96RN5 788 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 IL12RB2Q99665 862 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 OMDQ99983 421 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 C19orf43Q9BQ61 176 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 TUBGCP2Q9BSJ2 902 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ZSCAN5AQ9BUG6 496 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 NTMT1Q9BV86 223 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SERHL2Q9H4I8 314 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 FGF21Q9NSA1 209 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 P4HTMQ9NXG6 502 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 IL37Q9NZH6 218 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 OR6C2Q9NZP2 312 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 VPS18Q9P253 973 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SLC25A10Q9UBX3 287 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ST6GALNAC2Q9UJ37 374 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 OSGIN1Q9UJX0 560 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 MYO6Q9UM54 1294 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 PPIEQ9UNP9 301 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 RUVBL1Q9Y265 456 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 TMEM184BQ9Y519 407 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 COPG1Q9Y678 874 aaKnown RBP4.89□□□□□ -1.63
PABPC1-223ENST00000523636 SAR1BQ9Y6B6 198 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 ABCA1O95477 2261 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 MYH11P35749 1972 aa4.89□□□□□ -1.63
PABPC1-223ENST00000523636 A0A1B0GUH1 482 aa4.88□□□□□ -1.63
PABPC1-223ENST00000523636 FAM237BA0A1B0GVD1 139 aa4.88□□□□□ -1.63
PABPC1-223ENST00000523636 FAM92AA1XBS5 289 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms