RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 SLC44A1Q8WWI5 657 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 NAP1L4Q99733 375 aaKnown RBP3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 TREX2Q9BQ50 279 aaPredicted RBP3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 LRTM1Q9HBL6 345 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 NRBP2Q9NSY0 501 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 ZDHHC18Q9NUE0 388 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 SH3BGRL2Q9UJC5 107 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 SCN2AQ99250 2005 aa3.36□□□□□ -1.87
NSMCE2-211ENST00000523549 NUP210LQ5VU65 1888 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 FRMD3A2A2Y4 597 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 OR5K3A6NET4 321 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 C5orf60A6NFR6 353 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 CCL21O00585 134 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 HS3ST1O14792 307 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 ANKRD28O15084 1053 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 HOXC11O43248 304 aaPredicted RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 PDE9AO76083 593 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 POLBP06746 335 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 UGT1A1P22309 533 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 AXLP30530 894 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 NR2C2P49116 596 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 CCL11P51671 97 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 GALCP54803 685 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 KCNK10P57789 538 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 VAMP2P63027 116 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 YWHAHQ04917 246 aaPredicted RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 LAMTOR4Q0VGL1 99 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 GALNT2Q10471 571 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 BAK1Q16611 211 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 GSTA3Q16772 222 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 DEFB133Q30KQ1 61 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 DEFB113Q30KQ7 82 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 KRTCAP3Q53RY4 240 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 BSPRYQ5W0U4 402 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 ANO5Q75V66 913 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 PIWIL4Q7Z3Z4 852 aaKnown RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 TMEM25Q86YD3 366 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 RNF149Q8NC42 400 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 RBM15BQ8NDT2 890 aaKnown RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 OR2T3Q8NH03 318 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 PRPF31Q8WWY3 499 aaKnown RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 GTF3C6Q969F1 213 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 TMEM143Q96AN5 459 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 PHF21AQ96BD5 680 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 ART5Q96L15 291 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 SEC62Q99442 399 aaKnown RBP3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 ZNF559Q9BR84 538 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 NACAP1Q9BZK3 213 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 LRMDAQ9H2I8 198 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 SGK2Q9HBY8 427 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 IL1RAPL2Q9NP60 686 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 RPS10P5Q9NQ39 176 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 IRAK4Q9NWZ3 460 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 ACAD8Q9UKU7 415 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 SARDHQ9UL12 918 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 BTRCQ9Y297 605 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 PTPRJQ12913 1337 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
NSMCE2-211ENST00000523549 HERC1Q15751 4861 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 A0A1W2PPI3 338 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 NEMP2A6NFY4 417 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 TRIM64A6NGJ6 449 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 TRIM64BA6NI03 449 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 NEDD8-MDP1E9PL57 170 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 M0QZ24 198 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 SLC9A3R1O14745 358 aaPredicted RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 MSH4O15457 936 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 CYTH3O43739 400 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ZWINTO95229 277 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 PYGLP06737 847 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ABCD1P33897 745 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ARL1P40616 181 aaPredicted RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 TUFMP49411 452 aaKnown RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 VAMP7P51809 220 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 CDH8P55286 799 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 RPS14P62263 151 aaKnown RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 MBTD1Q05BQ5 628 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ZFP36L1Q07352 338 aaKnown RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 PTP4A2Q12974 167 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 MAD2L1Q13257 205 aaPredicted RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ENPP2Q13822 863 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 KIR2DS3Q14952 304 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 CHRNA6Q15825 494 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ZNF239Q16600 458 aaKnown RBP3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 TMEM95Q3KNT9 176 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 SLC39A12Q504Y0 691 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ALFQ53S48 1182 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ZSCAN25Q6NSZ9 544 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 XKRXQ6PP77 449 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 C12orf54Q6X4T0 127 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 GSTA5Q7RTV2 222 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ZNF440Q8IYI8 595 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 CNPY4Q8N129 248 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 APPL2Q8NEU8 664 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 GANCQ8TET4 914 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 ZNF653Q96CK0 615 aa3.34□□□□□ -1.87
NSMCE2-211ENST00000523549 RMND5BQ96G75 393 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms