RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 THOC5Q13769 683 aaKnown RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 OASLQ15646 514 aaKnown RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF549Q6P9A3 640 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 LCTLQ6UWM7 567 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 KIAA0408Q6ZU52 694 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 SLC13A5Q86YT5 568 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 CILP2Q8IUL8 1156 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 ULK2Q8IYT8 1036 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 ARMC10Q8N2F6 343 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 TBC1D19Q8N5T2 526 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 TC2NQ8N9U0 490 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 TMEM52Q8NDY8 209 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 EEF1AKMT1Q8WVE0 214 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 PERPQ96FX8 193 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 COX4I2Q96KJ9 171 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 RUNDC3BQ96NL0 473 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 TCF12Q99081 682 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 SARGQ9BW04 601 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 OR8D2Q9GZM6 311 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 BEX4Q9NWD9 120 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 PAK5Q9P286 719 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 MYOTQ9UBF9 498 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 STAB1Q9NY15 2570 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 ATRQ13535 2644 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 A0A1B0GVC2 190 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 A0A1W2PPR1 153 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 TRBC2A0A5B9 178 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 PABPN1LA6NDY0 278 aaKnown RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 SUSD5O60279 629 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF354AO60765 605 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 GUCA1CO95843 209 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 RFPL3SP0C7P2 107 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 OGNP20774 298 aaKnown RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 GPR143P51810 404 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 PWP1Q13610 501 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 CSHL1Q14406 222 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 PHKG1Q16816 387 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 HSDL2Q6YN16 418 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 GSTA5Q7RTV2 222 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 YTHDF3Q7Z739 585 aaKnown RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 LRRC57Q8N9N7 239 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 RNF214Q8ND24 703 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 CD200R1Q8TD46 325 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 DOK4Q8TEW6 326 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF592Q92610 1267 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF669Q96BR6 464 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 SNF8Q96H20 258 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 FAR2Q96K12 515 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 NDNQ99608 321 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 AARSD1Q9BTE6 412 aaKnown RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 LACRTQ9GZZ8 138 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 TRPS1Q9UHF7 1281 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 TRMT6Q9UJA5 497 aaKnown RBP10.74□□□□□ -0.69
SDCBP-211ENST00000523441 CAMK2AQ9UQM7 478 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 MED16Q9Y2X0 877 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 DHRS7Q9Y394 339 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 CLCA3PQ9Y6N3 262 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 HIVEP2P31629 2446 aa10.74□□□□□ -0.69
SDCBP-211ENST00000523441 TCRBV7S3A2A0A539 114 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 CLDN4O14493 209 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 IL2RAP01589 272 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 C8BP07358 591 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ENO3P13929 434 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 NID1P14543 1247 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 PAMP19021 973 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ANP32AP39687 249 aaKnown RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 VPS41P49754 854 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF136P52737 540 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ID2Q02363 134 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ASPHQ12797 758 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 RUNX2Q13950 521 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 DHX34Q14147 1143 aaKnown RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 TRIP13Q15645 432 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 TMPRSS11BQ86T26 416 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 KIAA1328Q86T90 577 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 LUZP2Q86TE4 346 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 CXorf67Q86X51 503 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 KIF18BQ86Y91 864 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 GPALPP1Q8IXQ4 340 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ANKRD53Q8N9V6 530 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 SIMC1Q8NDZ2 872 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 NT5CQ8TCD5 201 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 TRIB1Q96RU8 372 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 KIFC1Q9BW19 673 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 FAM129AQ9BZQ8 928 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 UBTD1Q9HAC8 227 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 INTS10Q9NVR2 710 aaKnown RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ARL15Q9NXU5 204 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ZFP69BQ9UJL9 534 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 SOX13Q9UN79 622 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ATG4BQ9Y4P1 393 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 NBEAL1Q6ZS30 2694 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 CHD3Q12873 2000 aaKnown RBP10.73□□□□□ -0.69
SDCBP-211ENST00000523441 ARID1AO14497 2285 aa10.73□□□□□ -0.69
SDCBP-211ENST00000523441 URADA6NGE7 173 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms