RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 BBS9Q3SYG4 887 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 ARSKQ6UWY0 536 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 GK5Q6ZS86 529 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 ZZZ3Q8IYH5 903 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 FAM109AQ8N4B1 249 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 SPC24Q8NBT2 197 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 SCYL1Q96KG9 808 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 FAM173AQ9BQD7 235 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 NPLQ9BXD5 320 aaPredicted RBP21.07■□□□□ 0.96
PVT1-218ENST00000523328 DLL4Q9NR61 685 aa21.07■□□□□ 0.96
PVT1-218ENST00000523328 CLDN4O14493 209 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 AQP7O14520 342 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 CNR1P21554 472 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 HNRNPH1P31943 449 aaKnown RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 STXBP1P61764 594 aaKnown RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 FOXO1Q12778 655 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 FOXD4Q12950 439 aaPredicted RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 SLC13A2Q13183 592 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 SNTB1Q13884 538 aaKnown RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 GALNT7Q86SF2 657 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.06■□□□□ 0.96
PVT1-218ENST00000523328 MAGOHBQ96A72 148 aaKnown RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 FAR2Q96K12 515 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 GPATCH1Q9BRR8 931 aaKnown RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 GSX1Q9H4S2 264 aaPredicted RBP21.06■□□□□ 0.96
PVT1-218ENST00000523328 IL1RL2Q9HB29 575 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 LZTFL1Q9NQ48 299 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 SLC17A6Q9P2U8 582 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 KCNE2Q9Y6J6 123 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 NCKAP5O14513 1909 aa21.06■□□□□ 0.96
PVT1-218ENST00000523328 SUSD5O60279 629 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 ZNF354AO60765 605 aaPredicted RBP21.05■□□□□ 0.96
PVT1-218ENST00000523328 FAM155BO75949 473 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 CELA3AP09093 270 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 SAT1P21673 171 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 HK2P52789 917 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 CCZ1BP86790 482 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 CCZ1P86791 482 aaPredicted RBP21.05■□□□□ 0.96
PVT1-218ENST00000523328 ELAVL1Q15717 326 aaKnown RBP21.05■□□□□ 0.96
PVT1-218ENST00000523328 HYAL4Q2M3T9 481 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 SLC25A35Q3KQZ1 300 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 HSDL2Q6YN16 418 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 RTL4Q6ZR62 310 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 CLNKQ7Z7G1 428 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 TMEM132CQ8N3T6 1108 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 FAM47BQ8NA70 645 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 SREK1Q8WXA9 508 aaKnown RBP21.05■□□□□ 0.96
PVT1-218ENST00000523328 MS4A6EQ96DS6 147 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 PDLIM5Q96HC4 596 aaKnown RBP21.05■□□□□ 0.96
PVT1-218ENST00000523328 QRFPRQ96P65 431 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 CLEC4MQ9H2X3 399 aaPredicted RBP21.05■□□□□ 0.96
PVT1-218ENST00000523328 RASSF1Q9NS23 344 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 MPDZO75970 2070 aa21.05■□□□□ 0.96
PVT1-218ENST00000523328 LRIT2A6NDA9 550 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 CYR61O00622 381 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 ERI3O43414 337 aaKnown RBP21.04■□□□□ 0.96
PVT1-218ENST00000523328 WDR1O75083 606 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 BMPR2Q13873 1038 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 ZNF595Q8IYB9 648 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 KLHDC8AQ8IYD2 350 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 GPATCH11Q8N954 259 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 GOLM1Q8NBJ4 401 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 GABPB2Q8TAK5 448 aaPredicted RBP21.04■□□□□ 0.96
PVT1-218ENST00000523328 PTPMT1Q8WUK0 201 aaPredicted RBP21.04■□□□□ 0.96
PVT1-218ENST00000523328 CSF3RQ99062 836 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 ACAD8Q9UKU7 415 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 RPH3AQ9Y2J0 694 aaPredicted RBP21.04■□□□□ 0.96
PVT1-218ENST00000523328 VWA7Q9Y334 891 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 CLCA3PQ9Y6N3 262 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 VPS13CQ709C8 3753 aa21.04■□□□□ 0.96
PVT1-218ENST00000523328 PROM1O43490 865 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 NRDCO43847 1150 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 BANF1O75531 89 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 TTC4O95801 387 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 TBX6O95947 436 aaPredicted RBP21.03■□□□□ 0.96
PVT1-218ENST00000523328 CDC25BP30305 580 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 DNASE1L1P49184 302 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 MAN2A2P49641 1150 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 CYP1B1Q16678 543 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 C1orf185Q5T7R7 199 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 CCDC137Q6PK04 289 aaKnown RBP21.03■□□□□ 0.96
PVT1-218ENST00000523328 ZNF662Q6ZS27 426 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 PPIL6Q8IXY8 311 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 ZNF321PQ8N8H1 164 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 MORN4Q8NDC4 146 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 TRIM58Q8NG06 486 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 RMND5BQ96G75 393 aaPredicted RBP21.03■□□□□ 0.96
PVT1-218ENST00000523328 CNPPD1Q9BV87 410 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 TUBA8Q9NY65 449 aaPredicted RBP21.03■□□□□ 0.96
PVT1-218ENST00000523328 MRPS33Q9Y291 106 aaKnown RBP21.03■□□□□ 0.96
PVT1-218ENST00000523328 PLEKHA6Q9Y2H5 1048 aa21.03■□□□□ 0.96
PVT1-218ENST00000523328 MYOCOSA0A1B0GUC4 107 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 ATP6AP2A0A1C7CYW4 349 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 B3GALT2O43825 422 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 ATP6AP2O75787 350 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 IFNA16P05015 189 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 CCL3P10147 92 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 ENDOUP21128 410 aaKnown RBP21.02■□□□□ 0.96
PVT1-218ENST00000523328 KIR2DL3P43628 341 aa21.02■□□□□ 0.96
PVT1-218ENST00000523328 SLC10A1Q14973 349 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms