RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 HS3ST3B1Q9Y662 390 aa4.71□□□□□ -1.66
CTNNA1-232ENST00000522013 ALG6Q9Y672 507 aa4.71□□□□□ -1.66
CTNNA1-232ENST00000522013 ANK3Q12955 4377 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-232ENST00000522013 MGAM2Q2M2H8 2515 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 MACROD2A1Z1Q3 448 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 GRID2IPA4D2P6 1211 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 OR6C74A6NCV1 312 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 OR5H15A6NDH6 313 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 J3KR12 359 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 EEF2KO00418 725 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 TRAFD1O14545 582 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 TTI1O43156 1089 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 DNPH1O43598 174 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SPOPO43791 374 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 NUAK1O60285 661 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SMPD2O60906 423 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ACTL6BO94805 426 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 INMTO95050 263 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 CD48P09326 243 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 CCDC175P0C221 793 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 TNNT1P13805 278 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ZNF8P17098 575 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 IL4RP24394 825 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 EPHB2P29323 1055 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 MSX2P35548 267 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SLC1A1P43005 524 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 MARCKSL1P49006 195 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 HCAR3P49019 387 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ARSEP51690 589 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SEC24CP53992 1094 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 NAP1L1P55209 391 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 CDH6P55285 790 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 DLX5P56178 289 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 TPI1P60174 286 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 FOXL1Q12952 345 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 PRKAA1Q13131 559 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 DPYSQ14117 519 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 KRT81Q14533 505 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 DPYSL2Q16555 572 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 HADHQ16836 314 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 DEFB110Q30KQ9 67 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 PDLIM3Q53GG5 364 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ZNF789Q5FWF6 425 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 TFDP3Q5H9I0 405 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 PPP6R3Q5H9R7 873 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ZNF766Q5HY98 468 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ZNF648Q5T619 568 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 LRRC38Q5VT99 294 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 LRRC66Q68CR7 880 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 MRNIPQ6NTE8 343 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 C11orf63Q6NUN7 778 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 MZT2BQ6NZ67 158 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 KLHL17Q6TDP4 642 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 KIRREL2Q6UWL6 708 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ARHGEF18Q6ZSZ5 1173 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 POLNQ7Z5Q5 900 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 PAQR7Q86WK9 346 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 RTL3Q8N8U3 475 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 LRRC57Q8N9N7 239 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 OR10Q1Q8NGQ4 319 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 POC1BQ8TC44 478 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 RAPGEF5Q92565 580 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 HDAC2Q92769 488 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 HAS2Q92819 552 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 CSPG4P5Q96PW8 444 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 RIOK2Q9BVS4 552 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 AP1M1Q9BXS5 423 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 OR2AG1Q9H205 316 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 CXorf36Q9H7Y0 433 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SEC61A2Q9H9S3 476 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SAYSD1Q9NPB0 183 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 ETNK2Q9NVF9 386 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 CWC15Q9P013 229 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
CTNNA1-232ENST00000522013 SVEP1Q4LDE5 3571 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 GSAPA4D1B5 854 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 LRRD1A4D1F6 860 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 HMX3A6NHT5 357 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 USP27XA6NNY8 438 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 MAP2K7O14733 419 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 DHHO43323 396 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 ZNF500O60304 480 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 CDC40O60508 579 aaKnown RBP eCLIP4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 OR2B3O76000 313 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 SUN1O94901 812 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 ZFPL1O95159 310 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 TSPAN15O95858 294 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 HPP00738 406 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 PRR35P0CG20 571 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 ZNF7P17097 686 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 ERCC2P18074 760 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 POLR2CP19387 275 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 KDELR1P24390 212 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 CTNNA2P26232 953 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 EEF1DP29692 281 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 UQCRC1P31930 480 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 HTR7P34969 479 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 CSNK1DP48730 415 aa4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 PAPOLAP51003 745 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-232ENST00000522013 CLCNKAP51800 687 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms