RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MBD3L3A6NE82 208 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 LRRC3CA6NJW4 275 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 CHST10O43529 356 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 LCMT2O60294 686 aaKnown RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANXA9O76027 345 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 MATN4O95460 622 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 MSNP26038 577 aaKnown RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 PPP2R1BP30154 601 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 PIGAP37287 484 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 MC3RP41968 323 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 CDKN2BP42772 138 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 CLCN2P51788 898 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 CRYZQ08257 329 aaKnown RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 VEZF1Q14119 521 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 WIPI1Q5MNZ9 446 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 C6orf52Q5T4I8 152 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 KCTD11Q693B1 232 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 PLEKHM3Q6ZWE6 761 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF534Q76KX8 674 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 LUZP2Q86TE4 346 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 KLHDC8BQ8IXV7 354 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 LRRC56Q8IYG6 542 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 C9orf106Q8NAJ2 232 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 PPFIBP2Q8ND30 876 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 OR13J1Q8NGT2 312 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 MBD3L2Q8NHZ7 208 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC22A8Q8TCC7 542 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 MCOLN3Q8TDD5 553 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 STYXQ8WUJ0 223 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 SREK1Q8WXA9 508 aaKnown RBP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 QKIQ96PU8 341 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 RASL10BQ96S79 203 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 EXO5Q9H790 373 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 SH2D2AQ9NP31 389 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 ACKR4Q9NPB9 350 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 KLHL28Q9NXS3 571 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 SPATA7Q9P0W8 599 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 MYOTQ9UBF9 498 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 NENFQ9UMX5 172 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 ATG4BQ9Y4P1 393 aa8.13□□□□□ -1.11
TRAPPC9-212ENST00000521944 SERINC4A6NH21 518 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 CD8B2A6NJW9 211 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 A8MXE2 369 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 E7ENX8 843 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 MYO1CO00159 1063 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 WWP2O00308 870 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 CST8O60676 142 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 MYO1DO94832 1006 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 APOA4P06727 396 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 CRYGSP22914 178 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 RBL1P28749 1068 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 RPA3P35244 121 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 COILP38432 576 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLCO1A2P46721 670 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 TRPC1P48995 793 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 TAP2Q03519 686 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 FAM27E3Q08E93 113 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 CT47A1Q5JQC4 288 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 EXOSC6Q5RKV6 272 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 TTC23LQ6PF05 361 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 QSOX2Q6ZRP7 698 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 FAM47EQ6ZV65 393 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 OTOAQ7RTW8 1153 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 LDB1Q86U70 411 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC26A11Q86WA9 606 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 GPALPP1Q8IXQ4 340 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 LRRC25Q8N386 305 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 ARIH2OSQ8N7S6 290 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 OR9A1PQ8NGU1 263 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 OR6P1Q8NGX9 317 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC44A1Q8WWI5 657 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 ASB15Q8WXK1 588 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 NCLNQ969V3 563 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 FAM46AQ96IP4 442 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 LCORQ96JN0 433 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 PKP4Q99569 1192 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 TBL1YQ9BQ87 522 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 BEX2Q9BXY8 128 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKHQ9HCJ1 492 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNHIT6Q9NWK9 470 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 PIH1D1Q9NWS0 290 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC2A6Q9UGQ3 507 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 SH2B3Q9UQQ2 575 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC22A7Q9Y694 548 aa8.12□□□□□ -1.11
TRAPPC9-212ENST00000521944 A0A0G2JK05 382 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 GSC2O15499 205 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 GALR3O60755 368 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 TPM2P07951 284 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 GSTT1P30711 240 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 CCKARP32238 428 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 CCNFP41002 786 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 DUSP8Q13202 625 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 GBX1Q14549 363 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 POU6F1Q14863 301 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 DCST1Q5T197 706 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 RNF187Q5TA31 235 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 RTL4Q6ZR62 310 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 ADCK2Q7Z695 626 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms