RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	NUDT17	P0C025	328 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	HIST1H1T	P22492	207 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CPN2	P22792	545 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ATP5A1	P25705	553 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PPP2R1B	P30154	601 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	HMOX2	P30519	316 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CASR	P41180	1078 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PIK3CB	P42338	1070 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ARG2	P78540	354 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ID2	Q02363	134 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ZNF33B	Q06732	778 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SLAMF1	Q13291	335 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	IGFBP7	Q16270	282 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	TMEM35A	Q53FP2	167 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PRR30	Q53SZ7	412 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	TCHHL1	Q5QJ38	904 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	DEPDC1	Q5TB30	811 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	FRG2	Q64ET8	278 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	OR4C11	Q6IEV9	310 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	JMJD6	Q6NYC1	403 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	METTL2B	Q6P1Q9	378 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ISLR2	Q6UXK2	745 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	LCA5	Q86VQ0	697 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SLC22A9	Q8IVM8	553 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SRRM1	Q8IYB3	904 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	RIBC1	Q8N443	379 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	KIF2B	Q8N4N8	673 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CDYL2	Q8N8U2	506 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	WDR20	Q8TBZ3	569 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ADAMTS18	Q8TE60	1221 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SELENOM	Q8WWX9	145 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CAVIN3	Q969G5	261 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	RGMA	Q96B86	450 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	FRG2B	Q96QU4	278 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	WDR77	Q9BQA1	342 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	TBCD	Q9BTW9	1192 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	NTMT1	Q9BV86	223 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	NPL	Q9BXD5	320 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ROGDI	Q9GZN7	287 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PRDM9	Q9NQV7	894 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PRDM7	Q9NQW5	492 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	FARSB	Q9NSD9	589 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PLA2G3	Q9NZ20	509 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	C5AR2	Q9P296	337 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	DCDC2	Q9UHG0	476 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ADGRE2	Q9UHX3	823 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	GRID1	Q9ULK0	1009 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SLC12A4	Q9UP95	1085 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SPACA6	W5XKT8	324 aa		7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SPEN	Q96T58	3664 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	TLN1	Q9Y490	2541 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SPTA1	P02549	2419 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941		A0A1W2PQ72	361 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	TCRBV16S1A1N1	A0A5B0	115 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	DYTN	A2CJ06	578 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SAGE2P	A6NJ88	616 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CLDN4	O14493	209 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PLIN3	O60664	434 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	EED	O75530	441 aa	Known RBP	7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	MYO1D	O94832	1006 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PDYN	P01213	254 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PTX3	P26022	381 aa	Predicted RBP	7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CCT5	P48643	541 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	HTR6	P50406	440 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PRKAA2	P54646	552 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	HNRNPH2	P55795	449 aa	Known RBP	7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SOX8	P57073	446 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SLC26A5	P58743	744 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	TNFRSF17	Q02223	184 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PCDH1	Q08174	1060 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	STX4	Q12846	297 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	MFAP5	Q13361	173 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	RCN2	Q14257	317 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	EXT1	Q16394	746 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	KRT71	Q3SY84	523 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CCDC153	Q494R4	210 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CRB2	Q5IJ48	1285 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CFAP157	Q5JU67	520 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ABHD17B	Q5VST6	288 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PLAG1	Q6DJT9	500 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CYP20A1	Q6UW02	462 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SCIMP	Q6UWF3	145 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ZYG11A	Q6WRX3	759 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	RIPOR1	Q6ZS17	1223 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	GPRIN3	Q6ZVF9	776 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	NUDT13	Q86X67	352 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	OR4N5	Q8IXE1	308 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	ZNF595	Q8IYB9	648 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941		Q8NA96	180 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	DNAJB14	Q8TBM8	379 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CPT1C	Q8TCG5	803 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PSMF1	Q92530	271 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	PNPLA2	Q96AD5	504 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	APOPT1	Q96IL0	206 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	IMMP1L	Q96LU5	166 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	FAM111A	Q96PZ2	611 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	KCNA7	Q96RP8	456 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	MRPL1	Q9BYD6	325 aa	Known RBP	7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	SHCBP1L	Q9BZQ2	653 aa		7.84	□□□□□ -1.15
CTNNA1-231	ENST00000521941	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.84	□□□□□ -1.15	2e-8	■■■□□ 15.5

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