RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 GPALPP1Q8IXQ4 340 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 MORN4Q8NDC4 146 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 PEX11GQ96HA9 241 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 AGAP4Q96P64 663 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 F2RL3Q96RI0 385 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 BARD1Q99728 777 aaKnown RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 CCT7Q99832 543 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 MACROD1Q9BQ69 325 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 STMN4Q9H169 189 aaPredicted RBP8.89□□□□□ -0.99
CLK4-209ENST00000521621 VTI1BQ9UEU0 232 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 TBK1Q9UHD2 729 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 TP53TG5Q9Y2B4 290 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 ASB4Q9Y574 426 aa8.89□□□□□ -0.99
CLK4-209ENST00000521621 FREM2Q5SZK8 3169 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 ANKRD12Q6UB98 2062 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 MANBAO00462 879 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 TM9SF1O15321 606 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 PROM1O43490 865 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 DNAJB5O75953 348 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 RAB8AP61006 207 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 TNFRSF17Q02223 184 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 TBL3Q12788 808 aaKnown RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 LY6DQ14210 128 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 PCLAFQ15004 111 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 SPRED3Q2MJR0 410 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 IRAK1BP1Q5VVH5 260 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 LETMD1Q6P1Q0 360 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 ISLR2Q6UXK2 745 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 LRRC34Q8IZ02 419 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 OR5T3Q8NGG3 340 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 CHTF18Q8WVB6 975 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 HAS2Q92819 552 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 FCRL1Q96LA6 429 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 ADAP2Q9NPF8 381 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 PCNAP12004 261 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 TRHRP34981 398 aaPredicted RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 ETV4P43268 484 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 CCL11P51671 97 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 GPR143P51810 404 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 SLC26A5P58743 744 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 RPS13P62277 151 aaKnown RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 ELAVL1Q15717 326 aaKnown RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 BEND6Q5SZJ8 279 aaPredicted RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 SRRM1Q8IYB3 904 aaKnown RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 TMEM132CQ8N3T6 1108 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 OR14A16Q8NHC5 309 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 ATP6V1E2Q96A05 226 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 ZNF354BQ96LW1 612 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 NSUN5Q96P11 429 aaKnown RBP8.88□□□□□ -0.99
CLK4-209ENST00000521621 SMC6Q96SB8 1091 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 LPAR4Q99677 370 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 PRTFDC1Q9NRG1 225 aa8.88□□□□□ -0.99
CLK4-209ENST00000521621 TRIM13O60858 407 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 SERPIND1P05546 499 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 DHRS4L1P0CG22 281 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 PCSK2P16519 638 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 SPIN4Q56A73 249 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 SFT2D3Q587I9 215 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 FBXO48Q5FWF7 155 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 ADNP2Q6IQ32 1131 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 ATG14Q6ZNE5 492 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 GPR180Q86V85 440 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 ELOVL6Q9H5J4 265 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 MCM8Q9UJA3 840 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.87□□□□□ -0.99
CLK4-209ENST00000521621 SUPT7LO94864 414 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 UROSP10746 265 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 CERS1P27544 350 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 TLX1P31314 330 aaPredicted RBP8.87□□□□□ -0.99
CLK4-209ENST00000521621 SLCO1A2P46721 670 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 STT3AP46977 705 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 RAP1GDS1P52306 607 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 OR4D2P58180 307 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 NSDHLQ15738 373 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 ZADH2Q8N4Q0 377 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 RBMXL3Q8N7X1 1067 aaKnown RBP8.87□□□□□ -0.99
CLK4-209ENST00000521621 SREK1Q8WXA9 508 aaKnown RBP8.87□□□□□ -0.99
CLK4-209ENST00000521621 ERP27Q96DN0 273 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 YIPF2Q9BWQ6 316 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 ZNF160Q9HCG1 818 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 SEMA4BQ9NPR2 832 aaPredicted RBP8.87□□□□□ -0.99
CLK4-209ENST00000521621 NECTIN3Q9NQS3 549 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 HAO1Q9UJM8 370 aa8.87□□□□□ -0.99
CLK4-209ENST00000521621 TBX19O60806 448 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 DNAJB6O75190 326 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 RSL1D1O76021 490 aaKnown RBP8.86□□□□□ -0.99
CLK4-209ENST00000521621 ZWINTO95229 277 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 TGFB1P01137 390 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 PDYNP01213 254 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 PDGFAP04085 211 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
CLK4-209ENST00000521621 BUD31P41223 144 aaPredicted RBP8.86□□□□□ -0.99
CLK4-209ENST00000521621 SSR2P43308 183 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 PSPHP78330 225 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 ABRAXAS2Q15018 415 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 CEBPEQ15744 281 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 CPSF6Q16630 551 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLK4-209ENST00000521621 SMU1Q2TAY7 513 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 FAM69BQ5VUD6 431 aa8.86□□□□□ -0.99
CLK4-209ENST00000521621 TMEM151BQ8IW70 566 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms