RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SHCBP1LQ9BZQ2 653 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 AMBRA1Q9C0C7 1298 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 SLC7A5P2Q9GIP4 190 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 DENND2DQ9H6A0 471 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 RMI1Q9H9A7 625 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 COG4Q9H9E3 785 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 FANCEQ9HB96 536 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 XPR1Q9UBH6 696 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ZDHHC2Q9UIJ5 367 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 VWA7Q9Y334 891 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 RAP2CQ9Y3L5 183 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 ARL5AQ9Y689 179 aa6.87□□□□□ -1.31
CTNNA1-227ENST00000521387 CR1P17927 2039 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 A0A0G2JNJ9 132 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 A0A1B0GTH9 108 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 MATN2O00339 956 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SYT5O00445 386 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CD3EAPO15446 510 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 TLX2O43763 284 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CD5LO43866 347 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 NPHS1O60500 1241 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 DNAJB6O75190 326 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SLC4A1P02730 911 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 LTA4HP09960 611 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PRSS56P0CW18 603 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CCDC166P0CW27 439 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PSMA3P25788 255 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PTGS2P35354 604 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 THBS2P35442 1172 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SOX18P35713 384 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PGM1P36871 562 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 GABRA4P48169 554 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 KCNC1P48547 511 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 ST13P50502 369 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 RPL14P50914 215 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SCNN1BP51168 640 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF140P52738 457 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SLC12A2P55011 1212 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 DNAJB13P59910 316 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PRAMEP78395 509 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 TNK1Q13470 666 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 NAA25Q14CX7 972 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 TSNAXIP1Q2TAA8 658 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 ICE2Q659A1 982 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF547Q8IVP9 402 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 MCATQ8IVS2 390 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 KBTBD2Q8IY47 623 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CARFQ8N187 725 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 BBS5Q8N3I7 341 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 POU5F2Q8N7G0 328 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 RBM15BQ8NDT2 890 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 MDS2Q8NDY4 140 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 GABPB2Q8TAK5 448 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PROKR1Q8TCW9 393 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 ZFPM2Q8WW38 1151 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SREK1Q8WXA9 508 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 C8orf44Q96CB5 159 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CXorf40BQ96DE9 158 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SCMH1Q96GD3 660 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CDKN2AIPNLQ96HQ2 116 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SIGLEC12Q96PQ1 595 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 PSKH2Q96QS6 385 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 OR52B2Q96RD2 323 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 MCCC1Q96RQ3 725 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 NUDCD1Q96RS6 583 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 MRPL57Q9BQC6 102 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CINPQ9BW66 212 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 MRPL46Q9H2W6 279 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM96AQ9H5X1 160 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 SYTL2Q9HCH5 934 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM60AQ9NP50 221 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 Q9UFV3 132 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 CDC42EP3Q9UKI2 254 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 RIMKLBQ9ULI2 386 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 RPL26L1Q9UNX3 145 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 NPFFR2Q9Y5X5 522 aa6.86□□□□□ -1.31
CTNNA1-227ENST00000521387 GOLGA8QA0A0J9YX86 632 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 GOLGA8OA6NCC3 632 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 OR6C74A6NCV1 312 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 A8MT66 165 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 GOLGA8NF8WBI6 632 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ZBTB14O43829 449 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ENTPD5O75356 428 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 BMP10O95393 424 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ANP32DO95626 131 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ONECUT2O95948 504 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SERPINA7P05543 415 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 PDHA1P08559 390 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 EPXP11678 715 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 GNAZP19086 355 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 TFEBP19484 476 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 NCF2P19878 526 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 FDXRP22570 491 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ATP5F1P24539 256 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CPOXP36551 454 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ADH7P40394 386 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms