RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TMEM132DQ14C87 1099 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 TEAD2Q15562 447 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR1C1Q15619 314 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 WSCD2Q2TBF2 565 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 KRTAP24-1Q3LI83 254 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 TAF1BQ53T94 588 aaPredicted RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 TCEAL6Q6IPX3 200 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 CAPN13Q6MZZ7 669 aaPredicted RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 Q6ZRP5 223 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 RBM43Q6ZSC3 357 aaKnown RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 TAF8Q7Z7C8 310 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 ITIH5Q86UX2 942 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC22A16Q86VW1 577 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 LACC1Q8IV20 430 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC43A2Q8N370 569 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR10G8Q8NGN5 311 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 SMPDL3AQ92484 453 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 ULK4Q96C45 1275 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 THOC3Q96J01 351 aaKnown RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 ERGIC2Q96RQ1 377 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 COQ7Q99807 217 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 TDRD1Q9BXT4 1180 aaKnown RBP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 IL20RAQ9UHF4 553 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM153AQ9UHL3 310 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 ERVK-19Q9WJR5 959 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 PYGO1Q9Y3Y4 419 aa2.98□□□□□ -1.93
HMGN1P28-201ENST00000521340 ATP8B3O60423 1300 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 DENND3A2RUS2 1198 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 NKX6-3A6NJ46 265 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 RASGRF2O14827 1237 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 EPHB6O15197 1021 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 LANCL1O43813 399 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 FGF17O60258 216 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 ANGPTL1O95841 491 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GUCA1CO95843 209 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 IGLV2-11P01706 119 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 ATP1A1P05023 1023 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GHRP10912 638 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 HOXB6P17509 224 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 RPL35AP18077 110 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GPX3P22352 226 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 PRDX6P30041 224 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCND2P30279 289 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 MAT2AP31153 395 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 ACAA2P42765 397 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 NSFP46459 744 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 XGP55808 180 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC26A5P58743 744 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 POLR2FP61218 127 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 KCNJ10P78508 379 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GALK2Q01415 458 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 PMP22Q01453 160 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 POU3F1Q03052 451 aaPredicted RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 PDIA5Q14554 519 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 EFTUD2Q15029 972 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 TAB1Q15750 504 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM106AQ4KMX7 169 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 NKAIN2Q5VXU1 208 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM159AQ6UWV7 190 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GDPD4Q6W3E5 623 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 AMZ2Q86W34 360 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC22A15Q8IZD6 547 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM71CQ8NEG0 241 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 C8orf46Q8TAG6 207 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GPR148Q8TDV2 347 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNF501Q96CX3 271 aaPredicted RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 RAB39BQ96DA2 213 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 CAPNS2Q96L46 248 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 AGPAT1Q99943 283 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 PAPOLGQ9BWT3 736 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 TRPV6Q9H1D0 765 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GANQ9H2C0 597 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 DCLRE1BQ9H816 532 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 GPN1Q9HCN4 374 aaPredicted RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 NGBQ9NPG2 151 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 STARD5Q9NSY2 213 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 C19orf25Q9UFG5 118 aaPredicted RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 HOOK1Q9UJC3 728 aaKnown RBP2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 EXOC7Q9UPT5 735 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 NCKAP1Q9Y2A7 1128 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR1A2Q9Y585 309 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 CUX1P39880 1505 aa2.97□□□□□ -1.93
HMGN1P28-201ENST00000521340 CUX2O14529 1486 aa2.96□□□□□ -1.93
HMGN1P28-201ENST00000521340 POLR1AO95602 1720 aaPredicted RBP2.96□□□□□ -1.93
HMGN1P28-201ENST00000521340 VPS8Q8N3P4 1428 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 IGHV4-4A0A075B6R2 117 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 IGKV2D-30A0A075B6S6 120 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 SHISA7A6NL88 538 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 PMS2P5A8MQ11 134 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 G3V2L1 256 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CSDE1O75534 798 aaKnown RBP2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 TRMUO75648 421 aaKnown RBP2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CEACAM4O75871 244 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 APBB3O95704 486 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 FGF19O95750 216 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 AMBPP02760 352 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 SERPINF2P08697 491 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms