RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 WDR36Q8NI36 951 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 ZNF707Q96C28 371 aaPredicted RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 RSPRY1Q96DX4 576 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 CAMK1GQ96NX5 476 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 TEFMQ96QE5 360 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 CHCHD6Q9BRQ6 235 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 POLR2J3Q9H1A7 115 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 HMG20AQ9NP66 347 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 ADAP2Q9NPF8 381 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 MBNL1Q9NR56 388 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 PLEKHM1Q9Y4G2 1056 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 LYVE1Q9Y5Y7 322 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 ANTXRLA6NF34 631 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 AGAP14A8MT82 685 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 AP3D1O14617 1153 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 MYL12BO14950 172 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 ACOX3O15254 700 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 PRAMEF4O60810 478 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 ASGR2P07307 311 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 OCM2P0CE71 109 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 OCMP0CE72 109 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 ACPPP15309 386 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CD36P16671 472 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 POLR2CP19387 275 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 CSNK2A2P19784 350 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 AK4P27144 223 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 PRR5P85299 388 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 PRAMEF9Q5VWM5 478 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 C8orf82Q6P1X6 216 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 Q6ZPB1 254 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 HSPBAP1Q96EW2 488 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 COQ10AQ96MF6 247 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SAMD11Q96NU1 681 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 RAB11FIP5Q9BXF6 653 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 LHPPQ9H008 270 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 NEUROD4Q9HD90 331 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 TVP23BQ9NYZ1 205 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 OTOL1A6NHN0 477 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 RNASET2O00584 256 aaKnown RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 NT5EP21589 574 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 GSTM5P46439 218 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 AVPR1BP47901 424 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CRISP3P54108 245 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 EPHA5P54756 1037 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 FADDQ13158 208 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CDK5R2Q13319 367 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 GAB1Q13480 694 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 GNA13Q14344 377 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SHHQ15465 462 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SMN1Q16637 294 aaKnown RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 TRIM69Q86WT6 500 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CLIP4Q8N3C7 705 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 TTLQ8NG68 377 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 OR5P2Q8WZ92 322 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 TPK1Q9H3S4 243 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SYNDIG1Q9H7V2 258 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 ASIC5Q9NY37 505 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 ERGIC3Q9Y282 383 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CCL27Q9Y4X3 112 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 DOCK4Q8N1I0 1966 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 URADA6NGE7 173 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 OR10H2O60403 315 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SERPINI2O75830 405 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 MT-ND2P03891 347 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CISD3P0C7P0 127 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 MPIP34949 423 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 MNX1P50219 401 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 RPS6KA3P51812 740 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 RGS8P57771 180 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 SELENOWP63302 87 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 RPA4Q13156 261 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 VEZF1Q14119 521 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 LRIF1Q5T3J3 769 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 ZNF730Q6ZMV8 503 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CROCCP3Q8IVE0 287 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 OR9Q2Q8NGE9 314 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 WDR20Q8TBZ3 569 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 CHTF18Q8WVB6 975 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 INSM2Q96T92 566 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 NRTNQ99748 197 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 C19orf43Q9BQ61 176 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 ZDHHC5Q9C0B5 715 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 BTBD1Q9H0C5 482 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SPNS1Q9H2V7 528 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 SPATA6Q9NWH7 488 aaPredicted RBP9.7□□□□□ -0.86
MCF2-209ENST00000520602 GALNT8Q9NY28 637 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 P2RX2Q9UBL9 471 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 MAN2B2Q9Y2E5 1009 aa9.7□□□□□ -0.86
MCF2-209ENST00000520602 C17orf113A0A1B0GUU1 675 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 M0R129 80 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 GPX2P18283 190 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 MAGP20916 626 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CD72P21854 359 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 MATN1P21941 496 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SOX6P35712 828 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 PIK3CBP42338 1070 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 RBBP4Q09028 425 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CCDC85BQ15834 202 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms