RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 WWC2-AS2Q96NR7 200 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 INTS7Q9NVH2 962 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 HEY2Q9UBP5 337 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 POLG2Q9UHN1 485 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 HPSEQ9Y251 543 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 YARS2Q9Y2Z4 477 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PRSS21Q9Y6M0 314 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PLECQ15149 4684 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 HECTD4Q9Y4D8 3996 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 STAB2Q8WWQ8 2551 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 A0A1W2PP18 115 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 SLC5A10A0PJK1 596 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 LRP5LA4QPB2 252 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF860A6NHJ4 632 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 H0YIG0 161 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 WWP2O00308 870 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 PES1O00541 588 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 CLOCKO15516 846 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 RDH16O75452 317 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 LRATO95237 230 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 F13BP05160 661 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 NUDT17P0C025 328 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 ATP1B2P14415 290 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 POU2F1P14859 743 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 PPP2R1BP30154 601 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 MIPP30301 263 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 NR4A2P43354 598 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 KIR2DL2P43627 348 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 LIMS1P48059 325 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 KRTAP10-3P60369 221 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF844Q08AG5 666 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 MSMPQ1L6U9 139 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 KCTD11Q693B1 232 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 RTL4Q6ZR62 310 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 GALNT12Q8IXK2 581 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF610Q8N9Z0 462 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 OR6P1Q8NGX9 317 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM71BQ8TC56 605 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 MRAPQ8TCY5 172 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 SYN2Q92777 582 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 IMP4Q96G21 291 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 TSG101Q99816 390 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 DPH7Q9BTV6 452 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 SELENOOQ9BVL4 669 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 CACNG6Q9BXT2 260 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 SLITRK2Q9H156 845 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 ACSS1Q9NUB1 689 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 CLCF1Q9UBD9 225 aa6.09□□□□□ -1.43
CTNNA1-216ENST00000519489 IGLV3-16A0A075B6K0 115 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 IGKV3D-11A0A0A0MRZ8 115 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 FAM95CA0A1B0GW59 222 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 LRRD1A4D1F6 860 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 E7ENX8 843 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 KCNK1O00180 336 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 RAMP1O60894 148 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 NSA2O95478 260 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 ACSL3O95573 720 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 YEATS4O95619 227 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 NDST3O95803 873 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 TSPAN15O95858 294 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 B3GALT4O96024 378 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 MAOAP21397 527 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 GCH1P30793 250 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 NAGLUP54802 743 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 DIO3P55073 304 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 LRRC63Q05C16 580 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 SLC10A2Q12908 348 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 ITGA9Q13797 1035 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 NRF1Q16656 503 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 EIPR1Q53HC9 387 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 COBLL1Q53SF7 1204 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 HP1BP3Q5SSJ5 553 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 PRAMEF20Q5VT98 475 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 SUSD1Q6UWL2 747 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 VN1R4Q7Z5H5 301 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 GPALPP1Q8IXQ4 340 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 C2CD4AQ8NCU7 369 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 ZPLD1Q8TCW7 415 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 ASB15Q8WXK1 588 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 FATE1Q969F0 183 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 CAVIN3Q969G5 261 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 PGM2Q96G03 612 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 FICDQ9BVA6 458 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 TRIM2Q9C040 744 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 KLHL4Q9C0H6 718 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 ARNT2Q9HBZ2 717 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 NECTIN3Q9NQS3 549 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 SACM1LQ9NTJ5 587 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 MAPRE3Q9UPY8 281 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 RNF115Q9Y4L5 304 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 CLDN16Q9Y5I7 305 aa6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-216ENST00000519489 A0A096LPE4 126 aa6.07□□□□□ -1.44
CTNNA1-216ENST00000519489 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
CTNNA1-216ENST00000519489 TCRBV16S1A1N1A0A5B0 115 aa6.07□□□□□ -1.44
CTNNA1-216ENST00000519489 CCL22O00626 93 aa6.07□□□□□ -1.44
CTNNA1-216ENST00000519489 PDE5AO76074 875 aa6.07□□□□□ -1.44
CTNNA1-216ENST00000519489 SRP72O76094 671 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-216ENST00000519489 TBXA2RP21731 343 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms