RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SNX7Q9UNH6 387 aa13.78□□□□□ -0.2
CLN8-204ENST00000519254 CABIN1Q9Y6J0 2220 aa13.78□□□□□ -0.2
CLN8-204ENST00000519254 DMDP11532 3685 aa13.77□□□□□ -0.2
CLN8-204ENST00000519254 A0A0J9YY10 115 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 CLIC1O00299 241 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 HNRNPRO43390 633 aaKnown RBP13.77□□□□□ -0.21
CLN8-204ENST00000519254 CLEC3AO75596 197 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 SERPIND1P05546 499 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 CDH3P22223 829 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 EPHA4P54764 986 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 POLE2P56282 527 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 SLC5A12Q1EHB4 618 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 MPEG1Q2M385 716 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 CCNYL2Q5T2Q4 361 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 R3HCC1LQ7Z5L2 792 aaKnown RBP13.77□□□□□ -0.21
CLN8-204ENST00000519254 CATSPER1Q8NEC5 780 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 TNIP2Q8NFZ5 429 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 FAM120BQ96EK7 910 aaKnown RBP13.77□□□□□ -0.21
CLN8-204ENST00000519254 TGM7Q96PF1 710 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 POMT2Q9UKY4 750 aa13.77□□□□□ -0.21
CLN8-204ENST00000519254 IGHV1OR21-1A0A087WYE8 117 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 RNASET2O00584 256 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 GSTA4O15217 222 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 NDUFS4O43181 175 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 PRAMEF10O60809 474 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 IL3P08700 152 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ZCCHC18P0CG32 403 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 BMP2P12643 396 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 GPX2P18283 190 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 GFERP55789 205 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 DAB2P98082 770 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ABHD18Q0P651 414 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ZIC1Q15915 447 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 MTX3Q5HYI7 312 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ZNF425Q6IV72 752 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 FIGLAQ6QHK4 219 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 IKBIPQ70UQ0 350 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 PAQR7Q86WK9 346 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 MMP21Q8N119 569 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 VPS37AQ8NEZ2 397 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 FIG4Q92562 907 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 RGMAQ96B86 450 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 MTERF3Q96E29 417 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 SARGQ9BW04 601 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 SYNDIG1Q9H7V2 258 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 AGPAT4Q9NRZ5 378 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 U3KQA8 63 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 RALGAPA1Q6GYQ0 2036 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 MYO15AQ9UKN7 3530 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 C1orf226A1L170 272 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 CXCR6O00574 342 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 DUX1O43812 170 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 KIF1CO43896 1103 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 SCELO95171 688 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ZNF26P17031 533 aaPredicted RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 RPL3P39023 403 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 HYAL2Q12891 473 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 SUZ12Q15022 739 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 PERM1Q5SV97 790 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 FCRL6Q6DN72 434 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 USP53Q70EK8 1073 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 PAGE2Q7Z2X7 111 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ANKFN1Q8N957 763 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 FAM181AQ8N9Y4 354 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 TTLQ8NG68 377 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 GOT1L1Q8NHS2 421 aaPredicted RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 CIDECQ96AQ7 238 aaPredicted RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 PPCDCQ96CD2 204 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 TM4SF18Q96CE8 201 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 REXO5Q96IC2 774 aaKnown RBP13.76□□□□□ -0.21
CLN8-204ENST00000519254 FCRL4Q96PJ5 515 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 CENPKQ9BS16 269 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 ATAD3AQ9NVI7 634 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 NCDNQ9UBB6 729 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 AP1M2Q9Y6Q5 423 aa13.76□□□□□ -0.21
CLN8-204ENST00000519254 B4GAT1O43505 415 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 TPST1O60507 370 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 GMNNO75496 209 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 ZNF806P0C7X5 589 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 ST6GAL1P15907 406 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 AHRP35869 848 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 GPR3P46089 330 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 MAPK12P53778 367 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 LRRC74AQ0VAA2 488 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 GAB1Q13480 694 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 SPRED1Q7Z699 444 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 AMER3Q8N944 861 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 ICA1LQ8NDH6 482 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 OR52E4Q8NGH9 312 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 SEPHS2Q99611 448 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms