RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 PKNOX1P55347 436 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 OR4D2P58180 307 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 DNAJB13P59910 316 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 NAA20P61599 178 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 BTG2P78543 158 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 ASPHQ12797 758 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 SLC13A2Q13183 592 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 CUL3Q13618 768 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 PCLAFQ15004 111 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 SFT2D3Q587I9 215 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 VWA5B1Q5TIE3 1220 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 FAM219BQ5XKK7 198 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 NUDT13Q86X67 352 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 C10orf107Q8IVU9 208 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 KBTBD2Q8IY47 623 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 PLPP5Q8NEB5 264 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 MYRIPQ8NFW9 859 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 TCP10LQ8TDR4 215 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 CSF3RQ99062 836 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 TUBB6Q9BUF5 446 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 SLC29A3Q9BZD2 475 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 ZNF700Q9H0M5 742 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 LYRM4Q9HD34 91 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 MID1IP1Q9NPA3 183 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 PRTFDC1Q9NRG1 225 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 OXSMQ9NWU1 459 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 SLC12A4Q9UP95 1085 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 ZNF451Q9Y4E5 1061 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 ATMQ13315 3056 aa13.7□□□□□ -0.22
TOP1MT-203ENST00000517857 PDYNP01213 254 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 PDGFAP04085 211 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 ENO1P06733 434 aaKnown RBP13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 CREB1P16220 341 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 CPN2P22792 545 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 TSFMP43897 325 aaKnown RBP13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 C19orf57Q0VDD7 668 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 SLAMF1Q13291 335 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 PAPD4Q6PIY7 484 aaKnown RBP13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 LRIG3Q6UXM1 1119 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 CLNKQ7Z7G1 428 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 IQCKQ8N0W5 287 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 ZNF843Q8N446 348 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 METTL6Q8TCB7 284 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 AGAP11Q8TF27 550 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 SREK1Q8WXA9 508 aaKnown RBP13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 HBEGFQ99075 208 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 LPAR4Q99677 370 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 MAPKAP1Q9BPZ7 522 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 LHPPQ9H008 270 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 FARSBQ9NSD9 589 aaKnown RBP13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 ZNF225Q9UK10 706 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 MMACHCQ9Y4U1 282 aa13.69□□□□□ -0.22
TOP1MT-203ENST00000517857 COL6A6A6NMZ7 2263 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 A0A1W2PQ72 361 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 ARHGAP10A1A4S6 786 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 MANBAO00462 879 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 SEMA3DO95025 777 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 SCELO95171 688 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 ESRRBO95718 433 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 CELA2AP08217 269 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 PRR35P0CG20 571 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 HNRNPFP52597 415 aaKnown RBP13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 AP2B1P63010 937 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 Q0VFX4 171 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 BEND6Q5SZJ8 279 aaPredicted RBP13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 PRICKLE2Q7Z3G6 844 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 ZNF595Q8IYB9 648 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 TEX19Q8NA77 164 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 TMEM52Q8NDY8 209 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 KCNA7Q96RP8 456 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 MECRQ9BV79 373 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 MRPL1Q9BYD6 325 aaKnown RBP13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 SHCBP1LQ9BZQ2 653 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 NECTIN3Q9NQS3 549 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 NMRK1Q9NWW6 199 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 LYARQ9NX58 379 aaKnown RBP13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 PSD3Q9NYI0 1048 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 AHSPQ9NZD4 102 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 PHF11Q9UIL8 331 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 PPT2Q9UMR5 302 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 PCDHGB7Q9Y5F8 929 aa13.68□□□□□ -0.22
TOP1MT-203ENST00000517857 TCRBV16S1A1N1A0A5B0 115 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 GOLGA6L10A6NI86 522 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 A8MUA0 341 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 H3BQF6 201 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 CTIFO43310 598 aaKnown RBP13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 TRIM13O60858 407 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 ULK1O75385 1050 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 EEDO75530 441 aaKnown RBP13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 GBAP04062 536 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 SERPINA7P05543 415 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 ICAM2P13598 275 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
TOP1MT-203ENST00000517857 TLX1P31314 330 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms