RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MARCOQ9UEW3 520 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 INTS6Q9UL03 887 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHA6Q9UN73 950 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 AURKCQ9UQB9 309 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PADI2Q9Y2J8 665 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAP2CQ9Y3L5 183 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ROBO3Q96MS0 1386 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ECM29Q5VYK3 1845 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 C2orf92A0A1B0GVN3 265 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM240BA0A1B0GVZ2 78 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1W2PPQ1 181 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC12A8A0AV02 714 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CIB4A0PJX0 185 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 C9orf170A2RU37 121 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 E5RJQ4 531 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 H3BQ06 376 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC1A7O00341 560 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 EI24O14681 340 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 IMPA2O14732 288 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC16A6O15403 523 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPAA1O43292 621 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 AKR7A2O43488 359 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TGM5O43548 720 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 LIASO43766 372 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PLOD3O60568 738 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TSPAN3O60637 253 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 GGCTO75223 188 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 POP7O75817 140 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZMPSTE24O75844 475 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SC5DO75845 299 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 IL33O95760 270 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 MT-CYBP00156 380 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 APOC3P02656 99 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 GP1BAP07359 652 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHRNGP07510 517 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 HMBSP08397 361 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SERPINF2P08697 491 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 HOXC4P09017 264 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PKMP14618 531 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CBR1P16152 277 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TSPAN8P19075 237 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NPR2P20594 1047 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 UBA1P22314 1058 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLRA2P23416 452 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NR2F2P24468 414 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRKCHP24723 683 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 POLR2IP36954 125 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FEN1P39748 380 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PMELP40967 661 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 MC3RP41968 323 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 OMPP47874 163 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 HSPA7P48741 367 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SRP9P49458 86 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RARRES1P49788 294 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANXA11P50995 505 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RORCP51449 518 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 KPNA2P52292 529 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CEBPGP53567 150 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 EPHA5P54756 1037 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARSFP54793 590 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAG2P55895 527 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ITGA1P56199 1179 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PKIAP61925 76 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPS6P62753 249 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 EIF5AP63241 154 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRR5P85299 388 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FOXO4P98177 505 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TFAMQ00059 246 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 DSC2Q02487 901 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ELP6Q0PNE2 266 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 LMAN2Q12907 356 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ECH1Q13011 328 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SPP2Q13103 211 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLAMF1Q13291 335 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 KLF1Q13351 362 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SMAD4Q13485 552 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SERINC3Q13530 473 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 USP10Q14694 798 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TAF1AQ15573 450 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TARBP2Q15633 366 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 KCTD19Q17RG1 926 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF528Q3MIS6 628 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 COQ5Q5HYK3 327 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NHLRC3Q5JS37 347 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 MLIPQ5VWP3 458 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM236Q5W0B7 351 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM198BQ6UWH4 519 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 HHIPL2Q6UWX4 724 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NPSR1Q6W5P4 371 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 HSDL2Q6YN16 418 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ISCA2Q86U28 154 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZBTB46Q86UZ6 589 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM160B2Q86V87 743 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PHF13Q86YI8 300 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SNX29P2Q8IUI4 249 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 EPHX4Q8IUS5 362 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 C10orf107Q8IVU9 208 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 MCEMP1Q8IX19 187 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF619Q8N2I2 560 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RTL3Q8N8U3 475 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms