RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PARP11Q9NR21 331 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 HACD3Q9P035 362 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 DDX20Q9UHI6 824 aaKnown RBP-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 PDE10AQ9Y233 779 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 TRIM17Q9Y577 477 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 FLVCR1Q9Y5Y0 555 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLCO1B1Q9Y6L6 691 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 PLEKHG1Q9ULL1 1385 aa-1.37□□□□□ -2.63
RNU6-542P-201ENST00000516405 MAP3K15Q6ZN16 1313 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 ABCA2Q9BZC7 2435 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 A0A087WZ39 114 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 ANHXE9PGG2 379 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 HAS3O00219 553 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 STX16O14662 325 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 NCK2O43639 380 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 PLA2G6O60733 806 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 CYTIPO60759 359 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 TBX19O60806 448 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 SAP30O75446 220 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 FSTL3O95633 263 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 URODP06132 367 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 MNDAP41218 407 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 PRIM2P49643 509 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 RPS27AP62979 156 aaKnown RBP-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 LMOD3Q0VAK6 560 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 BAATQ14032 418 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC10A1Q14973 349 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 ECSCRQ19T08 205 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 C14orf28Q4W4Y0 310 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 CMPK2Q5EBM0 449 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 CCDC181Q5TID7 509 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 OR4C11Q6IEV9 310 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 C14orf37Q86TY3 774 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 FBXW8Q8N3Y1 598 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 CARNMT1Q8N4J0 409 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF781Q8N8C0 355 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 ENAHQ8N8S7 591 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 C1orf64Q8NEQ6 169 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 EID2BQ96D98 161 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 MMABQ96EY8 250 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 PIWIL1Q96J94 861 aaKnown RBP-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 RPS6KC1Q96S38 1066 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 SHANK2-AS3Q9BTD1 123 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 MIS12Q9H081 205 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 Q9H3A6 140 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 DCLRE1BQ9H816 532 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 KIF9Q9HAQ2 790 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 CHST12Q9NRB3 414 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 C1orf112Q9NSG2 853 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 OBP2AQ9NY56 170 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 UBQLN2Q9UHD9 624 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC12A6Q9UHW9 1150 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 DBNLQ9UJU6 430 aaKnown RBP-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 RPS6KA6Q9UK32 745 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 FBXL5Q9UKA1 691 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 LIPGQ9Y5X9 500 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 THSD7BQ9C0I4 1608 aa-1.38□□□□□ -2.63
RNU6-542P-201ENST00000516405 NF1P21359 2839 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 MPDZO75970 2070 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 MACROD2A1Z1Q3 448 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF320A2RRD8 509 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 C2CD4DB7Z1M9 353 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 BBOX1O75936 387 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 POLR2MP0CAP2 368 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 P4HA1P13674 534 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 PAX3P23760 479 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ACAT1P24752 427 aaKnown RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 HOXA9P31269 272 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 HADHAP40939 763 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 XCR1P46094 333 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 HSPA7P48741 367 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 MTTPP55157 894 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 TIMM10P62072 90 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 BTG1P62324 171 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 NOP14P78316 857 aaKnown RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 NTHL1P78549 312 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 MRPS34P82930 218 aaKnown RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF616Q08AN1 781 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 DCTN2Q13561 401 aaKnown RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 GCKRQ14397 625 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ATXN7L3Q14CW9 347 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 STK11Q15831 433 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 SPANXN4Q5MJ08 99 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 LRIF1Q5T3J3 769 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 RNF165Q6ZSG1 346 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 PAQR9Q6ZVX9 377 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ADM2Q7Z4H4 148 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 UBALD2Q8IYN6 164 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 CEP57L1Q8IYX8 460 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 OR2L3Q8NG85 312 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 CCDC26Q8TAB7 109 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 BRI3BPQ8WY22 251 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 PIGBQ92521 554 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 PIK3R3Q92569 461 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 RBM18Q96H35 190 aaKnown RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 DHTKD1Q96HY7 919 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 ANKRD27Q96NW4 1050 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 NPAS2Q99743 824 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 NICN1Q9BSH3 213 aa-1.39□□□□□ -2.63
RNU6-542P-201ENST00000516405 CARD6Q9BX69 1037 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms