RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 GNL1P36915 607 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SSR1P43307 286 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 DHPSP49366 369 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CEBPDP49716 269 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 RASSF2P50749 326 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PLCD1P51178 756 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 RPP38P78345 283 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CX3CL1P78423 397 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 NUCB2P80303 420 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 NCBP1Q09161 790 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TROAPQ12815 778 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GAGE1Q13065 139 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GAGE4Q13068 117 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 BTG3Q14201 252 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GPR18Q14330 331 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GK2Q14410 553 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 INPP5JQ15735 1006 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SSX2Q16385 188 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 DUSP6Q16828 381 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 FSCBQ5H9T9 825 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GRTP1Q5TC63 336 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 NDUFAF5Q5TEU4 345 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 NKAIN2Q5VXU1 208 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 OR4A47Q6IF82 309 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 BLOC1S2Q6QNY1 142 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 METAP1DQ6UB28 335 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PARM1Q6UWI2 310 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM159AQ6UWV7 190 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CES3Q6UWW8 571 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CWC27Q6UX04 472 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PLXDC2Q6UX71 529 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 LINGO4Q6UY18 593 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 Q6YL49 198 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF517Q6ZMY9 492 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM131BQ86XD5 332 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GPALPP1Q8IXQ4 340 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PALM2Q8IXS6 379 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CDK20Q8IZL9 346 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 APCDD1Q8J025 514 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GBGT1Q8N5D6 347 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CPSF7Q8N684 471 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TMEM99Q8N816 258 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SMYD1Q8NB12 490 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 BHLHE23Q8NDY6 225 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 OR52I2Q8NH67 350 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GOLGA5Q8TBA6 731 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 RNF128Q8TEB7 428 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 CHPT1Q8WUD6 406 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TMEM255BQ8WV15 326 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC44A1Q8WWI5 657 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF75CPQ92670 426 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PIGTQ969N2 578 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 FBXO32Q969P5 355 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 NCLNQ969V3 563 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PHF21AQ96BD5 680 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SARAFQ96BY9 339 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 LGALS12Q96DT0 336 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 C16orf58Q96GQ5 468 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TXNDC15Q96J42 360 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 COG3Q96JB2 828 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 MARK4Q96L34 752 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 OR1F2PQ96R84 312 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TAAR6Q96RI8 345 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 RHOXF2Q9BQY4 288 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ALG12Q9BV10 488 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 MLST8Q9BVC4 326 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SSBP3Q9BWW4 388 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TBC1D10AQ9BXI6 508 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 POLDIP3Q9BY77 421 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 WWTR1Q9GZV5 400 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 GANQ9H2C0 597 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 KCNN2Q9H2S1 579 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 RIMS4Q9H426 269 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ZCCHC4Q9H5U6 513 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 C11orf49Q9H6J7 331 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ZDHHC6Q9H6R6 413 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 RPAP3Q9H6T3 665 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 UPF2Q9HAU5 1272 aaKnown RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PCDH9Q9HC56 1237 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 POLD4Q9HCU8 107 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 HPS4Q9NQG7 708 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 YAE1D1Q9NRH1 226 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 OLFML3Q9NRN5 406 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TCP11L1Q9NUJ3 509 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 SYBUQ9NX95 663 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 MIS18AQ9NYP9 233 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ERVK-18Q9QC07 812 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 IL20RAQ9UHF4 553 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ST6GALNAC2Q9UJ37 374 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF490Q9ULM2 529 aaPredicted RBP2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 WDR83OSQ9Y284 106 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 NCKAP1Q9Y2A7 1128 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 TMED3Q9Y3Q3 217 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 PCDHAC2Q9Y5I4 1007 aa2.53□□□□□ -2
SCARNA17.1-201ENST00000516211 ACACBO00763 2458 aa2.52□□□□□ -2.01
SCARNA17.1-201ENST00000516211 SF3B1O75533 1304 aaKnown RBP eCLIP2.52□□□□□ -2.01
SCARNA17.1-201ENST00000516211 MAP3K19Q56UN5 1328 aa2.52□□□□□ -2.01
SCARNA17.1-201ENST00000516211 CLSPNQ9HAW4 1339 aa2.52□□□□□ -2.01
SCARNA17.1-201ENST00000516211 DDX60LQ5H9U9 1706 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms