RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 AIG1Q9NVV5 245 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 DHCR7Q9UBM7 475 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 RALYQ9UKM9 306 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 TRIM33Q9UPN9 1127 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 MAPRE3Q9UPY8 281 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 DLGAP4Q9Y2H0 992 aa11.33□□□□□ -0.6
PDLIM5-220ENST00000514830 AKAP13Q12802 2813 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 ZFYVE26Q68DK2 2539 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 CROCCQ5TZA2 2017 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 ARHGAP10A1A4S6 786 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SGK494L7N484 410 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 PROM1O43490 865 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 TMPRSS11DO60235 418 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 TBX19O60806 448 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SH3BGRLO75368 114 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 NTRK1P04629 796 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 KLK1P06870 262 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 KLK3P07288 261 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 ANXA4P09525 319 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 ALDOCP09972 364 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 FAM58BPP0C7Q3 252 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 DRD2P14416 443 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 AGXTP21549 392 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 MAPK12P53778 367 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 LIM2P55344 173 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 RAB38P57729 211 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 DCDP81605 110 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SLAMF1Q13291 335 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 RUNX2Q13950 521 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 CYP20A1Q6UW02 462 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 GPR180Q86V85 440 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 C7orf57Q8NEG2 295 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 TM4SF18Q96CE8 201 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 MTERF3Q96E29 417 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 MMABQ96EY8 250 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 PPP1R36Q96LQ0 422 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 ELAC2Q9BQ52 826 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SLC7A5P2Q9GIP4 190 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF385DQ9H6B1 395 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 WDR54Q9H977 334 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 MKKSQ9NPJ1 570 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SDR39U1Q9NRG7 319 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 SLC22A11Q9NSA0 550 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 EHD3Q9NZN3 535 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 FOXJ2Q9P0K8 574 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 GIMAP2Q9UG22 337 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 MSRB2Q9Y3D2 182 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 GPR45Q9Y5Y3 372 aa11.32□□□□□ -0.6
PDLIM5-220ENST00000514830 CCDC88CQ9P219 2028 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 A0A0G2JN53 185 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 GNG14A0A1W2PPG7 69 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 VSTM2BA6NLU5 285 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 EIF4E1BA6NMX2 242 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 CYR61O00622 381 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ANKRD28O15084 1053 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 UBDO15205 165 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 SLC22A2O15244 555 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 CHST10O43529 356 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 RDH16O75452 317 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 RAB40ALP0C0E4 278 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 FBLP22087 321 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ALAS2P22557 587 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ADSLP30566 484 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 SLC5A2P31639 672 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 RPL3P39023 403 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 CLDN8P56748 225 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 TNFRSF17Q02223 184 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 KLC1Q07866 573 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 PDCD4Q53EL6 469 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 GKAP1Q5VSY0 366 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 IL23RQ5VWK5 629 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 MRPL14Q6P1L8 145 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 COX15Q7KZN9 410 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 OVCH1Q7RTY7 1134 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 DTX1Q86Y01 620 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 RIMKLAQ8IXN7 391 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 CPSF7Q8N684 471 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ESX1Q8N693 406 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 OR51Q1Q8NH59 317 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 C16orf78Q8WTQ4 265 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 STARD8Q92502 1023 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 THOC1Q96FV9 657 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF578Q96N58 590 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 THSD1Q9NS62 852 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 C14orf105Q9NVL8 296 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 TAS2R7Q9NYW3 318 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 DKK4Q9UBT3 224 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms