RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 MAOAP21397 527 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 KRT6CP48668 564 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 Q0VFX4 171 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 ASPHQ12797 758 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 AIMP2Q13155 320 aaKnown RBP13.12□□□□□ -0.31
USP46-209ENST00000514536 CASP8Q14790 479 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 PCOLCEQ15113 449 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 GALNT16Q8N428 558 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 AMER2Q8N7J2 671 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 C9orf43Q8TAL5 461 aaPredicted RBP13.12□□□□□ -0.31
USP46-209ENST00000514536 AGAP11Q8TF27 550 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 KCNA7Q96RP8 456 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 CSF3RQ99062 836 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 HBEGFQ99075 208 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 MAPKAP1Q9BPZ7 522 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 LYRM4Q9HD34 91 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 SSU72Q9NP77 194 aaKnown RBP13.12□□□□□ -0.31
USP46-209ENST00000514536 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
USP46-209ENST00000514536 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 SLC12A4Q9UP95 1085 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 KALRNO60229 2985 aa13.12□□□□□ -0.31
USP46-209ENST00000514536 CYR61O00622 381 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 EEDO75530 441 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 CEACAM4O75871 244 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 SCELO95171 688 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 NR1D1P20393 614 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 ITGA3P26006 1051 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 BSGP35613 385 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 ETV4P43268 484 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 TSFMP43897 325 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 HNRNPFP52597 415 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 ARFIP1P53367 373 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 FOXA1P55317 472 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 OR4D2P58180 307 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 ACTN3Q08043 901 aaPredicted RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 RCN2Q14257 317 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 TCTN3Q6NUS6 607 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 QSOX2Q6ZRP7 698 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 CNDP1Q96KN2 507 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 NUDT9Q9BW91 350 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 ZNF717Q9BY31 904 aaPredicted RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 MRPL1Q9BYD6 325 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 NECTIN3Q9NQS3 549 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 PRDM9Q9NQV7 894 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 TP53TG5Q9Y2B4 290 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 MED13Q9UHV7 2174 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 CLDN4O14493 209 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 SEC24DO94855 1032 aaPredicted RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 SEMA3DO95025 777 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 GBAP04062 536 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 BPGMP07738 259 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 CHN1P15882 459 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 CPN2P22792 545 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 HTR6P50406 440 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 SOX8P57073 446 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 GPR180Q86V85 440 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 ZNF595Q8IYB9 648 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 ZCCHC7Q8N3Z6 543 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 ADAMTS18Q8TE60 1221 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 THOC3Q96J01 351 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 IMMP1LQ96LU5 166 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 BRF2Q9HAW0 419 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 MLXIPLQ9NP71 852 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 RIC8BQ9NVN3 520 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 GPR83Q9NYM4 423 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 AHSPQ9NZD4 102 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 G3BP2Q9UN86 482 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 MRPS33Q9Y291 106 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 MMACHCQ9Y4U1 282 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 PCDHGA9Q9Y5G4 932 aaKnown RBP13.11□□□□□ -0.31
USP46-209ENST00000514536 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 SPACA6W5XKT8 324 aa13.11□□□□□ -0.31
USP46-209ENST00000514536 GCN1Q92616 2671 aaKnown RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 IGKV3D-11A0A0A0MRZ8 115 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 H3BQF6 201 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 TMPRSS11DO60235 418 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 CRCPO75575 148 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 PDGFAP04085 211 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 KLK1P06870 262 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 CELA2AP08217 269 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 FAM58BPP0C7Q3 252 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 SERPINB3P29508 390 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 HNRNPH2P55795 449 aaKnown RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 HSD17B7P56937 341 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms