RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ARMC2Q8NEN0 867 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 SARAFQ96BY9 339 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 SNF8Q96H20 258 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 ZFP69BQ9UJL9 534 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 MMACHCQ9Y4U1 282 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 MED12Q93074 2177 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 DOCK7Q96N67 2140 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 CUBNO60494 3623 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 TRGV5A0A0B4J1U4 118 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 CTAGE9A4FU28 777 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 EPXP11678 715 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 SLC1A2P43004 574 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 TERF1P54274 439 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 SLC10A1Q14973 349 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 PCBP2Q15366 365 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■■■■ 27.4
HMGCS1-206ENST00000511774 RTL4Q6ZR62 310 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 FAM47EQ6ZV65 393 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 SLC13A5Q86YT5 568 aaPredicted RBP17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 OR56A3Q8NH54 315 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 NEIL2Q969S2 332 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 SLC6A15Q9H2J7 730 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 LDAHQ9H6V9 325 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 PARVBQ9HBI1 364 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 ATG4BQ9Y4P1 393 aa17.56■□□□□ 0.4
HMGCS1-206ENST00000511774 A0A0G2JN53 185 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 HSPB2A8KAH6 182 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 H7C1Q1 480 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 HAUS5O94927 633 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 CEACAM8P31997 349 aaPredicted RBP17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 PIGAP37287 484 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 PEX19P40855 299 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 SKP1P63208 163 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 POU4F3Q15319 338 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 HSPB2Q16082 182 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 CLNKQ7Z7G1 428 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 LRRN4CLQ8ND94 238 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 HAUS8Q9BT25 410 aa17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 FRMD8P1Q9BZ68 369 aaPredicted RBP17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 CLK4Q9HAZ1 481 aaKnown RBP17.55■□□□□ 0.4
HMGCS1-206ENST00000511774 ZCWPW2A0A1B0GU75 182 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 CLCA1A8K7I4 914 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 INAFM1C9JVW0 142 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 CLDN4O14493 209 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 HCN1O60741 890 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 HRGP04196 525 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 GABRA1P14867 456 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 CCND1P24385 295 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 AHRP35869 848 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 ZNF136P52737 540 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 PGGT1BP53609 377 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 REEP5Q00765 189 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 TOR1AIP1Q5JTV8 583 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 SHEQ5VZ18 495 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 FBXW10Q5XX13 1052 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 UGT3A1Q6NUS8 523 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 NIPAL1Q6NVV3 410 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 CAND1Q86VP6 1230 aaKnown RBP17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 PTPMT1Q8WUK0 201 aaPredicted RBP17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 TSNARE1Q96NA8 513 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 EXO5Q9H790 373 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 ZNF703Q9H7S9 590 aaPredicted RBP17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 PRTFDC1Q9NRG1 225 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 BEX4Q9NWD9 120 aaPredicted RBP17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 SAMD15Q9P1V8 674 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 CAPN6Q9Y6Q1 641 aa17.54■□□□□ 0.4
HMGCS1-206ENST00000511774 TUBAL3A6NHL2 446 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 LRRC3CA6NJW4 275 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 FAM47E-STBD1D6RA91 191 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 EIF3FO00303 357 aaPredicted RBP17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 DVL2O14641 736 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 C8GP07360 202 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 BTN3A2P78410 334 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 DHX34Q14147 1143 aaKnown RBP17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 Q5PR19 223 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 FAM47BQ8NA70 645 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 GOLM1Q8NBJ4 401 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 CSF3RQ99062 836 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 NDNQ99608 321 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 CCDC68Q9H2F9 335 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 PROK2Q9HC23 129 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 SH2D2AQ9NP31 389 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 ADAP2Q9NPF8 381 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 SACM1LQ9NTJ5 587 aa17.53■□□□□ 0.4
HMGCS1-206ENST00000511774 TPSB2P20231 275 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 TRPC1P48995 793 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 AGFG1P52594 562 aaKnown RBP17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 TPSAB1Q15661 275 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 ACSF3Q4G176 576 aaPredicted RBP17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 ANKRD22Q5VYY1 191 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 DUPD1Q68J44 220 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 PAQR3Q6TCH7 311 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 HSDL2Q6YN16 418 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 AGGF1Q8N302 714 aaeCLIP17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 SLC5A11Q8WWX8 675 aa17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.52■□□□□ 0.4
HMGCS1-206ENST00000511774 FAM171A2A8MVW0 826 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms