RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
MBD4-209ENST00000511009 RPGRIP1Q96KN7 1286 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 CTAGE1Q96RT6 745 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 S1PR3Q99500 378 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 SSX3Q99909 188 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 AGPAT1Q99943 283 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 FTHL17Q9BXU8 183 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 SIRPDQ9H106 197 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 MMP28Q9H239 520 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 ATP13A3Q9H7F0 1226 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 S100A14Q9HCY8 104 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 SLC52A3Q9NQ40 469 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 OR1A2Q9Y585 309 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 UBE4BO95155 1302 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 FAM205AQ6ZU69 1335 aa4.13□□□□□ -1.75
MBD4-209ENST00000511009 IGHV4-4A0A075B6R2 117 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 NKX6-3A6NJ46 265 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 SOCS5O75159 536 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 SYNGR4O95473 234 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 PAK4O96013 591 aaPredicted RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 VTNP04004 478 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 LYNP07948 512 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 RALAP11233 206 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 GNSP15586 552 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 DNAJB1P25685 340 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 PRDX6P30041 224 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 OR1D2P34982 312 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 MAP2K2P36507 400 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 ALDH3B1P43353 468 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 TNFRSF4P43489 277 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 TKTL1P51854 596 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 MTTPP55157 894 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 RPL36AP83881 106 aaKnown RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 BTG3Q14201 252 aaPredicted RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 ZRSR1Q15695 479 aaKnown RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 CEBPEQ15744 281 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 GPAT3Q53EU6 434 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 MPPE1Q53F39 396 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 FFAR4Q5NUL3 377 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 LDLRAP1Q5SW96 308 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 STPG1Q5TH74 334 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 PLPP4Q5VZY2 271 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 HIST2H2AA3Q6FI13 130 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 Q71RC1 249 aaPredicted RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 CHMP1BQ7LBR1 199 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 LACC1Q8IV20 430 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 C9orf106Q8NAJ2 232 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 OR5AP2Q8NGF4 316 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 OR5T2Q8NGG2 359 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 OR56B1Q8NGI3 324 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 OR6S1Q8NH40 331 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 OR4L1Q8NH43 312 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 GPR148Q8TDV2 347 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 RAB39BQ96DA2 213 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 GPR137Q96N19 417 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 TSGA13Q96PP4 275 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 TAAR6Q96RI8 345 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 NUSAP1Q9BXS6 441 aaKnown RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 UBE2TQ9NPD8 197 aaPredicted RBP4.12□□□□□ -1.75
MBD4-209ENST00000511009 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.12□□□□□ -1.75
MBD4-209ENST00000511009 ERVK-18Q9QC07 812 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 WDR37Q9Y2I8 494 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 ATP6V0A2Q9Y487 856 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 UMODL1Q5DID0 1318 aa4.12□□□□□ -1.75
MBD4-209ENST00000511009 A0A0U1RRA0 63 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 hCG_38984A0A1B0GV85 526 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 PMS2P5A8MQ11 134 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 ZNF195O14628 629 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 GRID2O43424 1007 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 PCDH7O60245 1069 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 SCGB2A1O75556 95 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 AP2A2O94973 939 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 CALCAP01258 141 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 ERVK-10P10266 1014 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 GIFP27352 417 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 HLA-FP30511 346 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 FEN1P39748 380 aaKnown RBP4.11□□□□□ -1.75
MBD4-209ENST00000511009 SOX3P41225 446 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 CCR4P51679 360 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 XGP55808 180 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 BTG1P62324 171 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 SPP2Q13103 211 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 HNRNPDQ14103 355 aaKnown RBP4.11□□□□□ -1.75
MBD4-209ENST00000511009 EFTUD2Q15029 972 aaKnown RBP eCLIP4.11□□□□□ -1.75
MBD4-209ENST00000511009 TAF7Q15545 349 aaPredicted RBP4.11□□□□□ -1.75
MBD4-209ENST00000511009 C3AR1Q16581 482 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 RTL6Q6ICC9 239 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 GALNT17Q6IS24 598 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 CDHR3Q6ZTQ4 885 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 TMEM26Q6ZUK4 368 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 BNIPLQ7Z465 357 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 HOGA1Q86XE5 327 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 LSMEM2Q8N112 164 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 CNPY4Q8N129 248 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 LRRC17Q8N6Y2 441 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 MAPK15Q8TD08 544 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 SMAP2Q8WU79 429 aaPredicted RBP4.11□□□□□ -1.75
MBD4-209ENST00000511009 CHURC1Q8WUH1 139 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 GATAD1Q8WUU5 269 aa4.11□□□□□ -1.75
MBD4-209ENST00000511009 MRPL53Q96EL3 112 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms