RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TLDC1Q6P9B6 456 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 BLOC1S3Q6QNY0 202 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 GSG1LQ6UXU4 331 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 C16orf59Q7L2K0 433 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ZNF419Q96HQ0 510 aaPredicted RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 TMEM185BQ9H7F4 350 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 SLAMF7Q9NQ25 335 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 NIPAL4Q0D2K0 466 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 UAP1L1Q3KQV9 507 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 RAD9AQ99638 391 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TIMM22Q9Y584 194 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TBC1D3BA6NDS4 549 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 KIAA0513O60268 411 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 PIAS1O75925 651 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 MYCLP1P12525 358 aaPredicted RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 AVPR1BP47901 424 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 SNTB2Q13425 540 aaKnown RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 ENPP2Q13822 863 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TMEM198Q66K66 360 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 NANOGP8Q6NSW7 305 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 PAPD5Q8NDF8 572 aaKnown RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 TMED9Q9BVK6 235 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 NANOGQ9H9S0 305 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 MRPS30Q9NP92 439 aaKnown RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 S100A7P31151 101 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ZNF763Q0D2J5 394 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 LY6KQ17RY6 165 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 SCGB2B2Q4G0G5 96 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 LINGO4Q6UY18 593 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 RTP4Q96DX8 246 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.08□□□□□ -1.12
HTT-208ENST00000510626 ZDHHC3Q9NYG2 299 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TLR5O60602 858 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 C1RP00736 705 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ITPKBP27987 946 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TAS2R39P59534 338 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 C1QTNF8P60827 252 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TBATAQ96M53 351 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 NELL2Q99435 816 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 PCDHB14Q9Y5E9 798 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ACOT7O00154 380 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 HOXB9P17482 250 aaPredicted RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 SOX10P56693 466 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 BAMBIQ13145 260 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 PLEKHS1Q5SXH7 462 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 UQCC3Q6UW78 93 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 C3orf49Q96BT1 292 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 C5orf34Q96MH7 638 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 FCRL3Q96P31 734 aaPredicted RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 KNDC1Q76NI1 1749 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 JRKO75564 520 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ALX3O95076 343 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 NTRK2Q16620 822 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 OR52E8Q6IFG1 317 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 OTOP3Q7RTS5 596 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 RNF130Q86XS8 419 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 OR52E4Q8NGH9 312 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ZDHHC5Q9C0B5 715 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 GBA2Q9HCG7 927 aaPredicted RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 RNF181Q9P0P0 153 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 COL5A2P05997 1499 aaPredicted RBP8.08□□□□□ -1.12
HTT-208ENST00000510626 SEC14L5O43304 696 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 GJA1P17302 382 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 CHATP28329 748 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 ANKRD46Q86W74 232 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 JOSD2Q8TAC2 188 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 PRRT1Q99946 306 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 TTYH2Q9BSA4 534 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 G6PC3Q9BUM1 346 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 SCN3AQ9NY46 2000 aa8.08□□□□□ -1.12
HTT-208ENST00000510626 LCMT2O60294 686 aaKnown RBP8.07□□□□□ -1.12
HTT-208ENST00000510626 HK3P52790 923 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 TAS2R50P59544 299 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 SLC36A3Q495N2 470 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 OR8K3Q8NH51 312 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 MROQ9BYG7 248 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 ACTL8Q9H568 366 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
HTT-208ENST00000510626 ZFC3H1O60293 1989 aaKnown RBP8.07□□□□□ -1.12
HTT-208ENST00000510626 STC1P52823 247 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 CAP1Q01518 475 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 GALNT2Q10471 571 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 MEP1AQ16819 746 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 RPL22L1Q6P5R6 122 aaKnown RBP8.07□□□□□ -1.12
HTT-208ENST00000510626 SMARCD2Q92925 531 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 FBXL20Q96IG2 436 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 LURAP1Q96LR2 239 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 ACP6Q9NPH0 428 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 PCDHGA8Q9Y5G5 932 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 CEP250Q9BV73 2442 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 UNC119BA6NIH7 251 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 BCKDHAP12694 445 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 NKX6-1P78426 367 aaPredicted RBP8.07□□□□□ -1.12
HTT-208ENST00000510626 RNF212Q495C1 297 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 AWAT2Q6E213 333 aa8.07□□□□□ -1.12
HTT-208ENST00000510626 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
HTT-208ENST00000510626 DPY19L2P1Q6NXN4 242 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms