RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZNF223Q9UK11 482 aaPredicted RBP12.72□□□□□ -0.37
SNF8-206ENST00000509989 J3QKU1 62 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 PLIN3O60664 434 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 PDYNP01213 254 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 KRT4P19013 534 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 HIST1H1TP22492 207 aaPredicted RBP12.71□□□□□ -0.37
SNF8-206ENST00000509989 ATP5F1P24539 256 aaPredicted RBP12.71□□□□□ -0.37
SNF8-206ENST00000509989 GSTM2P28161 218 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 PIK3CBP42338 1070 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 PRKAA2P54646 552 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 FOXA1P55317 472 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 SLC26A5P58743 744 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 SLC18A2Q05940 514 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 OR4C11Q6IEV9 310 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 SCIMPQ6UWF3 145 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 IGFL3Q6UXB1 125 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 MILR1Q7Z6M3 343 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 ZNF321PQ8N8H1 164 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNF8-206ENST00000509989 ANKRD9Q96BM1 317 aaPredicted RBP12.71□□□□□ -0.37
SNF8-206ENST00000509989 SEC16BQ96JE7 1060 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 KCNC2Q96PR1 638 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 TUBB6Q9BUF5 446 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 NPLQ9BXD5 320 aaPredicted RBP12.71□□□□□ -0.37
SNF8-206ENST00000509989 PRDM9Q9NQV7 894 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 PRTFDC1Q9NRG1 225 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 RIC8BQ9NVN3 520 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 SLC17A7Q9P2U7 560 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 RAB21Q9UL25 225 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 TMCO1Q9UM00 188 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 TSC22D4Q9Y3Q8 395 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 ATG4BQ9Y4P1 393 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 PCDHGA11Q9Y5H2 935 aa12.71□□□□□ -0.37
SNF8-206ENST00000509989 RELNP78509 3460 aa12.71□□□□□ -0.38
SNF8-206ENST00000509989 MYO18BQ8IUG5 2567 aa12.71□□□□□ -0.38
SNF8-206ENST00000509989 SVILO95425 2214 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 UBR5O95071 2799 aaPredicted RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 FLNCQ14315 2725 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 A8MUI8 341 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 PSMD12O00232 456 aaPredicted RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 PRKNO60260 465 aaPredicted RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 UGDHO60701 494 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 DPM1O60762 260 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 CDH16O75309 829 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 GLRA3O75311 464 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 SPAG7O75391 227 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 SCELO95171 688 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 GSTA1P08263 222 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 IMPDH1P20839 514 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 IL10P22301 178 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 CRHR1P34998 444 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 SSR2P43308 183 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 ACTN3Q08043 901 aaPredicted RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 SLAMF1Q13291 335 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 MFAP5Q13361 173 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 RASA2Q15283 850 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 CRB2Q5IJ48 1285 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 AGAP7PQ5VUJ5 663 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 PLAG1Q6DJT9 500 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 EMBQ6PCB8 327 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 ISLR2Q6UXK2 745 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 ZYG11AQ6WRX3 759 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 TRABD2AQ86V40 505 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 CRLF3Q8IUI8 442 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 MMP21Q8N119 569 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 CDYL2Q8N8U2 506 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 AGAP4Q96P64 663 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 TBCDQ9BTW9 1192 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 MRPL1Q9BYD6 325 aaKnown RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 SHCBP1LQ9BZQ2 653 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 COPS7BQ9H9Q2 264 aaPredicted RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 LIN28AQ9H9Z2 209 aaKnown RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 PNO1Q9NRX1 252 aaKnown RBP12.7□□□□□ -0.38
SNF8-206ENST00000509989 C5AR2Q9P296 337 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 DCDC2Q9UHG0 476 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 LGALS13Q9UHV8 139 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 ASB4Q9Y574 426 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 TIMM22Q9Y584 194 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 PCDHGB7Q9Y5F8 929 aa12.7□□□□□ -0.38
SNF8-206ENST00000509989 A0A0A6YYD5 115 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 A0A1W2PR48 441 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 GLOD5A6NK44 160 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 TTLL8A6PVC2 850 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 FGF17O60258 216 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 WISP2O76076 250 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 WDPCPO95876 746 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 TAC1P20366 129 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 JAK1P23458 1154 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 UQCRFS1P47985 274 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 SLC13A2Q13183 592 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 PCLAFQ15004 111 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 AP5B1Q2VPB7 878 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 GGTA1PQ4G0N0 100 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 TMEM35AQ53FP2 167 aa12.69□□□□□ -0.38
SNF8-206ENST00000509989 ZNF468Q5VIY5 522 aaPredicted RBP12.69□□□□□ -0.38
SNF8-206ENST00000509989 FRG2Q64ET8 278 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms