RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 EFCAB11Q9BUY7 163 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC7A5P2Q9GIP4 190 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 ING2Q9H160 280 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 OR51B5Q9H339 312 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 NT5DC2Q9H857 520 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 NOL11Q9H8H0 719 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SEMA4BQ9NPR2 832 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 NECTIN3Q9NQS3 549 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PRDM7Q9NQW5 492 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF71Q9NQZ8 489 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC17A7Q9P2U7 560 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 OPTCQ9UBM4 332 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 C3orf18Q9UK00 162 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF223Q9UK11 482 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 MKL2Q9ULH7 1088 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PLAAQ9Y263 795 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PTGDR2Q9Y5Y4 395 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 KCNE2Q9Y6J6 123 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 COL12A1Q99715 3063 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 SHANK1Q9Y566 2161 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 FLNCQ14315 2725 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 A0A0A6YYD5 115 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 WASHC1A8K0Z3 465 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 SYCE1LA8MT33 242 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MAGEB17A8MXT2 336 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 CYR61O00622 381 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 CHST10O43529 356 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 TYROBPO43914 113 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 CLEC3AO75596 197 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 SEC24DO94855 1032 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 OR4F21O95013 312 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 SERPINA6P08185 405 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MAOAP21397 527 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ETV4P43268 484 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 PRKAA2P54646 552 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 RPS13P62277 151 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 GALNT1Q10472 559 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 DDX39BQ13838 428 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MPP2Q14168 576 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ZRSR2Q15696 482 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 FAM214AQ32MH5 1076 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 GGTA1PQ4G0N0 100 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ZYG11AQ6WRX3 759 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 DGAT2L6Q6ZPD8 337 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 TAOK1Q7L7X3 1001 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ANKRD37Q7Z713 158 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 PTRH1Q86Y79 214 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 RBMXL3Q8N7X1 1067 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 BANPQ8N9N5 519 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 FAM47BQ8NA70 645 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ACMSDQ8TDX5 336 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 AGAP11Q8TF27 550 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 APOBEC4Q8WW27 367 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MIEF2Q96C03 454 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 L3HYPDHQ96EM0 354 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 APOPT1Q96IL0 206 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 SCYL1Q96KG9 808 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 IMMP1LQ96LU5 166 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 CATSPER2Q96P56 530 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ZIM3Q96PE6 472 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MAPKAP1Q9BPZ7 522 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MECRQ9BV79 373 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 TMEM109Q9BVC6 243 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF552Q9H707 407 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 IPPKQ9H8X2 491 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 CNOT10Q9H9A5 744 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF160Q9HCG1 818 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 MKKSQ9NPJ1 570 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 C14orf105Q9NVL8 296 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 KCMF1Q9P0J7 381 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF282Q9UDV7 671 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 GPN3Q9UHW5 284 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 GRID1Q9ULK0 1009 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 SCN2AQ99250 2005 aa6.77□□□□□ -1.33
TOPBP1-207ENST00000509162 A0A096LPE4 126 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 IQANK1A0A1B0GTG1 560 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 MYOCOSA0A1B0GUC4 107 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 A0A1W2PPZ6 126 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ARHGAP10A1A4S6 786 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 FAM221AA4D161 298 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 PABPN1LA6NDY0 278 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 A6NL46 340 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 H0YIV9 168 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 AGPSO00116 658 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 CLGNO14967 610 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 PRKNO60260 465 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 CDH16O75309 829 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 GLRA3O75311 464 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 SPAG7O75391 227 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 SORBS2O94875 1100 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 TGFB1P01137 390 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 S100BP04271 92 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 CHRNGP07510 517 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 FHP07954 510 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 RBP1P09455 135 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ITGAMP11215 1152 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 EPXP11678 715 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms