RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NBPF19A0A087WUL8 3843 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 CLDN4O14493 209 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 WISP2O76076 250 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 UNC5CO95185 931 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 SIX3O95343 332 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 DDAH2O95865 285 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 IFNA16P05015 189 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 MYBL2P10244 700 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 COL8A1P27658 744 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ECHS1P30084 290 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 HPDP32754 393 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ARL1P40616 181 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 SSR2P43308 183 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ID2Q02363 134 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 TGM3Q08188 693 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 SETDB1Q15047 1291 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ACAP2Q15057 778 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 TBCCQ15814 346 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF324BQ6AW86 544 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF793Q6ZN11 406 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 CEP128Q6ZU80 1094 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 UBE3DQ7Z6J8 389 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 FJX1Q86VR8 437 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 NFAM1Q8NET5 270 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 OR7G3Q8NG95 312 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 RHEBL1Q8TAI7 183 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 SEC16BQ96JE7 1060 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 SCYL1Q96KG9 808 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 KCNC2Q96PR1 638 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 MAPKAP1Q9BPZ7 522 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 DEFB126Q9BYW3 111 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 OR51B5Q9H339 312 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 ACTR8Q9H981 624 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 LRFN1Q9P244 771 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 SH3BGRL2Q9UJC5 107 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 FBXW2Q9UKT8 454 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 DAPP1Q9UN19 280 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 IKBKGQ9Y6K9 419 aa13.84□□□□□ -0.19
UBE2D3-228ENST00000508974 LDB3O75112 727 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 CLDN1O95832 211 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 CRYABP02511 175 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 CD46P15529 392 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 EEF1DP29692 281 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 CASP2P42575 452 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 RAP1GDS1P52306 607 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 HSD17B7P56937 341 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 MAPKAPK3Q16644 382 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 C4orf17Q53FE4 359 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 TECRLQ5HYJ1 363 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 GRHL2Q6ISB3 625 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 GALNTL5Q7Z4T8 443 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 GOLGA7Q7Z5G4 137 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 ZNF595Q8IYB9 648 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 LAS2Q8IYD9 372 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 ACOT4Q8N9L9 421 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 APCDD1LQ8NCL9 501 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 B3GNT7Q8NFL0 401 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 ADAMTS18Q8TE60 1221 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 SLC44A1Q8WWI5 657 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 UBE2E3Q969T4 207 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 NCLNQ969V3 563 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 GPR78Q96P69 363 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 MTERF1Q99551 399 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 LIN28AQ9H9Z2 209 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 PLSCR2Q9NRY7 297 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 SEC14L3Q9UDX4 400 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 CLDN16Q9Y5I7 305 aa13.83□□□□□ -0.2
UBE2D3-228ENST00000508974 NAV2Q8IVL1 2488 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CYR61O00622 381 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 NEURL1O76050 574 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 ATP5A1P25705 553 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CLCN2P51788 898 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 ALDH18A1P54886 795 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 MLF1P58340 268 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 STX4Q12846 297 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 GTF2H2Q13888 395 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 AP5B1Q2VPB7 878 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 KHDRBS2Q5VWX1 349 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 GTF2H2CQ6P1K8 395 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 C16orf47Q6ZP98 133 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CHSY3Q70JA7 882 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 TAOK1Q7L7X3 1001 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 RELL1Q8IUW5 271 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 PTGR2Q8N8N7 351 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 HUS1BQ8NHY5 278 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 KIF18AQ8NI77 898 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 PHF21BQ96EK2 531 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CMTM7Q96FZ5 175 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 IPPKQ9H8X2 491 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 ZNF223Q9UK11 482 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 NFU1Q9UMS0 254 aa13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 DIDO1Q9BTC0 2240 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-228ENST00000508974 DOPEY1Q5JWR5 2465 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms