RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CEP128Q6ZU80 1094 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 GDF7Q7Z4P5 450 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 TBC1D1Q86TI0 1168 aaPredicted RBP12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 MCEMP1Q8IX19 187 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 CTAGE3PQ8IX95 158 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 OR8K3Q8NH51 312 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 OR14A16Q8NHC5 309 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 C16orf52Q8NHV5 167 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 QRFPRQ96P65 431 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 VKORC1Q9BQB6 163 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 HES7Q9BYE0 225 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 CD244Q9BZW8 370 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 MS4A12Q9NXJ0 267 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 COQ3Q9NZJ6 369 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 NUDT4Q9NZJ9 180 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 SH3BGRL2Q9UJC5 107 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 DAPP1Q9UN19 280 aa12.69□□□□□ -0.38
CCHCR1-227ENST00000508852 NCOA6Q14686 2063 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 ABCA12Q86UK0 2595 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 A8MUA0 341 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 TAPBPO15533 448 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 ITGA10O75578 1167 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 TUBB4AP04350 444 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 IFNA16P05015 189 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 COX7A2P14406 83 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 HSPA7P48741 367 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 PLA2G16P53816 162 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 LIM2P55344 173 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 PCDH1Q08174 1060 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 BMPR2Q13873 1038 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 DOC2AQ14183 400 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 E2F2Q14209 437 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 AP5B1Q2VPB7 878 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 CAPN12Q6ZSI9 719 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 SHISA5Q8N114 240 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 NCLNQ969V3 563 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 TMEM79Q9BSE2 394 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 DPH5Q9H2P9 285 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 SMYD2Q9NRG4 433 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 VTI1BQ9UEU0 232 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 TINAGQ9UJW2 476 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 ERVK-11Q9UQG0 969 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 LRBAP50851 2863 aa12.68□□□□□ -0.38
CCHCR1-227ENST00000508852 A8MVJ9 347 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 K7EPI3 171 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 ACOT7O00154 380 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CYR61O00622 381 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 PHGDHO43175 533 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 PEX1O43933 1283 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CCNT2O60583 730 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 PPP2R1BP30154 601 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CASQ1P31415 396 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 PTGS2P35354 604 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 MEOX1P50221 254 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 GPR143P51810 404 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 PHEXP78562 749 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CHIT1Q13231 466 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 FAM83EQ2M2I3 478 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 ZNF468Q5VIY5 522 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 METTL2BQ6P1Q9 378 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 MED27Q6P2C8 311 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 ARHGAP11AQ6P4F7 1023 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 SULF2Q8IWU5 870 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CPSF7Q8N684 471 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 ZFP62Q8NB50 900 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 RHEBL1Q8TAI7 183 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 UBTD2Q8WUN7 234 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 ASB15Q8WXK1 588 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 REPS1Q96D71 796 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CMTM7Q96FZ5 175 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 SGCZQ96LD1 299 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 AICDAQ9GZX7 198 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 MYOTQ9UBF9 498 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 ZNF490Q9ULM2 529 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 PCNX1Q96RV3 2341 aa12.67□□□□□ -0.38
CCHCR1-227ENST00000508852 A0A087X1B8 175 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 CXorf49A8MYA2 514 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 C4orf51C9J302 202 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 RAD51CO43502 376 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 KERAO60938 352 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 SCELO95171 688 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 LTA4HP09960 611 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 EPB42P16452 691 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 TNNI3P19429 210 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 ELAVL4P26378 380 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 TLX1P31314 330 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 MSH2P43246 934 aa12.66□□□□□ -0.38
CCHCR1-227ENST00000508852 MAGEA4P43358 317 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms