RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SP140LQ9H930 580 aa10.55□□□□□ -0.72
SH3RF1-203ENST00000508685 THUMPD1Q9NXG2 353 aaKnown RBP10.55□□□□□ -0.72
SH3RF1-203ENST00000508685 FBXL12Q9NXK8 326 aa10.55□□□□□ -0.72
SH3RF1-203ENST00000508685 ENOPH1Q9UHY7 261 aa10.55□□□□□ -0.72
SH3RF1-203ENST00000508685 OSGIN1Q9UJX0 560 aa10.55□□□□□ -0.72
SH3RF1-203ENST00000508685 PLAGL1Q9UM63 463 aa10.55□□□□□ -0.72
SH3RF1-203ENST00000508685 A0A1W2PQF6 199 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 H0YIV9 168 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ADAMDEC1O15204 470 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 LRATO95237 230 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ETHE1O95571 254 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ANXA8P13928 327 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 COL9A1P20849 921 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 TGM1P22735 817 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 NTSR1P30989 418 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 MAP2K4P45985 399 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 WNT3P56703 355 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ACSM2AQ08AH3 577 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 CDC20Q12834 499 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 KRR1Q13601 381 aaKnown RBP10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 UGT8Q16880 541 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 CATSPEREQ5SY80 951 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 IER5LQ5T953 404 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ACSM2BQ68CK6 577 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 CCDC81Q6ZN84 652 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 PLEKHG7Q6ZR37 379 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF551Q7Z340 670 aaPredicted RBP10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 PTOV1Q86YD1 416 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 C2orf73Q8N5S3 287 aaPredicted RBP10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 FBXO15Q8NCQ5 510 aaPredicted RBP10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 OR14C36Q8NHC7 312 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 NDNFQ8TB73 568 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 IL17FQ96PD4 163 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 DOHHQ9BU89 302 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 DUSP26Q9BV47 211 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 DPEP2Q9H4A9 486 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 WDR26Q9H7D7 661 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 TPT1P8Q9HAU6 139 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 CPNE5Q9HCH3 593 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 FZD3Q9NPG1 666 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 SPATA6Q9NWH7 488 aaPredicted RBP10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 ASF1AQ9Y294 204 aa10.54□□□□□ -0.72
SH3RF1-203ENST00000508685 EFCAB9A8MZ26 197 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 ANHXE9PGG2 379 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 H3BQ06 376 aaPredicted RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 hCG_2039718K7EN88 272 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 LATO43561 262 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CD36P16671 472 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 NPPBP16860 134 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 ITGA2P17301 1181 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 NR4A1P22736 598 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 MAT2AP31153 395 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 PCGF2P35227 344 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 MASP1P48740 699 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 TMED10P49755 219 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 VBP1P61758 197 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 VLDLRP98155 873 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 TAP2Q03519 686 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 TBCEQ15813 527 aaPredicted RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 HKDC1Q2TB90 917 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CPTPQ5TA50 214 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 NCCRP1Q6ZVX7 275 aaPredicted RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 USP43Q70EL4 1123 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 PDZD3Q86UT5 571 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 LRRTM4Q86VH4 590 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 AMER2Q8N7J2 671 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 OR9A1PQ8NGU1 263 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CRELD1Q96HD1 420 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 GABRG3Q99928 467 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 MYOCQ99972 504 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 SLIRPQ9GZT3 109 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 RUBCNLQ9H714 662 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 SGK2Q9HBY8 427 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CD93Q9NPY3 652 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 EXD2Q9NVH0 621 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF282Q9UDV7 671 aaPredicted RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 VPS4AQ9UN37 437 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 KCNE2Q9Y6J6 123 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 TMEM247A6NEH6 219 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 SCAMP2O15127 329 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 KLF8O95600 359 aaPredicted RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CPSF4O95639 269 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 FADS2O95864 444 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 BMP4P12644 408 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CYP4B1P13584 511 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 HOXB2P14652 356 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 GGT2P36268 569 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 RPL3P39023 403 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 CLK1P49759 484 aaKnown RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 ADPRHP54922 357 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 OLR1P78380 273 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 MEF2AQ02078 507 aaPredicted RBP10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 RBBP4Q09028 425 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF181Q2M3W8 571 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF404Q494X3 552 aa10.53□□□□□ -0.72
SH3RF1-203ENST00000508685 SPIN4Q56A73 249 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms