RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KIAA0141Q14154 515 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 FGD3Q5JSP0 725 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 RNF130Q86XS8 419 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 SUMF1Q8NBK3 374 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 KCTD6Q8NC69 237 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 SSC4DQ8WTU2 575 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 PGM2Q96G03 612 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 ZNF558Q96NG5 402 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 SLF1Q9BQI6 1058 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 RIMS4Q9H426 269 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 PHPT1Q9NRX4 125 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 ATRXP46100 2492 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 KDRP35968 1356 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 RNF103O00237 685 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 PHF1O43189 567 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 FYNP06241 537 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 YES1P07947 543 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 MTCP1P56278 107 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 ERVK-16P61578 105 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 AIMP1Q12904 312 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 RBBP7Q16576 425 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 UPP1Q16831 310 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 CST9Q5W186 159 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 CST9LP1Q5W188 147 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 MFN1Q8IWA4 741 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 RPLP0P6Q8NHW5 317 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 TYMSOSQ8TAI1 123 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 SPPL2AQ8TCT8 520 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 CASP10Q92851 521 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 EXT2Q93063 718 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 PSMB7Q99436 277 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 CCDC28BQ9BUN5 200 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 JPT2Q9H910 190 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 RNF121Q9H920 327 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 PKD2L2Q9NZM6 624 aa4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 PRRC2AP48634 2157 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-206ENST00000508524 ITGB4P16144 1822 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 URADA6NGE7 173 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 UBE2CO00762 179 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 MAGEB2O15479 319 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 DIAPH2O60879 1101 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 HPP00738 406 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 MYL6BP14649 208 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 C4BPBP20851 252 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 PPP5CP53041 499 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 OR4N5Q8IXE1 308 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 P2RX5Q93086 422 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 C11orf52Q96A22 123 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 NXPE2Q96DL1 559 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 ZNF414Q96IQ9 312 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 RBM41Q96IZ5 413 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 POLLQ9UGP5 575 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 MRPS18CQ9Y3D5 142 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 CD163L1Q9NR16 1453 aa4.05□□□□□ -1.76
TOPBP1-206ENST00000508524 DLEC1Q9Y238 1755 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 hCG_38984A0A1B0GV85 526 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 A0A1W2PNU3 283 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 ZNF840PA6NDX5 716 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 ARHGEF33A8MVX0 844 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 KLLNB2CW77 178 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 F8VVB4 439 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 F8VWA3 439 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 RPLP0P05388 317 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 STAG3L1P0CL83 205 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 CDC25CP30307 473 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 GPR183P32249 361 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 KHKP50053 298 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 CLDN17P56750 224 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 KYNUQ16719 465 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 RNF212Q495C1 297 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 TTC27Q6P3X3 843 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 ENPP7Q6UWV6 458 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 OR9Q2Q8NGE9 314 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 NSMAFQ92636 917 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 GDAP1L1Q96MZ0 367 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 FN3KQ9H479 309 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 ZNF107Q9UII5 783 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 PILRAQ9UKJ1 303 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 POMT2Q9UKY4 750 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 SCN11AQ9UI33 1791 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 MON2Q7Z3U7 1717 aa4.04□□□□□ -1.76
TOPBP1-206ENST00000508524 COL4A5P29400 1685 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 KIAA0100Q14667 2235 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 DICER1Q9UPY3 1922 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 FER1L6Q2WGJ9 1857 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 RNF123Q5XPI4 1314 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 NKX6-3A6NJ46 265 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 A8MVM7 634 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 MTRF1O75570 445 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 PRDM1O75626 825 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 TCF4P15884 667 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 ACAT1P24752 427 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 PKLRP30613 574 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 MZT1Q08AG7 82 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 PIGWQ7Z7B1 504 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 AMIGO1Q86WK6 493 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 FGFRL1Q8N441 504 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 CCDC63Q8NA47 563 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms