RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 THOC2Q8NI27 1593 aaKnown RBP3.32□□□□□ -1.88
UBE2D3-225ENST00000508476 COL16A1Q07092 1604 aaPredicted RBP3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 PDS5BQ9NTI5 1447 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 P2RX6O15547 441 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 GBAP04062 536 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 UMPSP11172 480 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 ADRA2CP18825 462 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 SPRP35270 261 aaPredicted RBP3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 ADARP55265 1226 aaKnown RBP3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 LTB4RQ15722 352 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 PCK2Q16822 640 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 C1orf141Q5JVX7 400 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 UTF1Q5T230 341 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 FAM91A1Q658Y4 838 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 RFWD3Q6PCD5 774 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 MEX3DQ86XN8 651 aaKnown RBP3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 CREBRFQ8IUR6 639 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 CCDC191Q8NCU4 936 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 BADQ92934 168 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 RIT1Q92963 219 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 MGME1Q9BQP7 344 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 TEX13BQ9BXU2 312 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 OR10A4Q9H209 315 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 PNNQ9H307 717 aaKnown RBP3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 Q9UF83 564 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 FBXO7Q9Y3I1 522 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 RALGAPA1Q6GYQ0 2036 aa3.31□□□□□ -1.88
UBE2D3-225ENST00000508476 SYNJ2O15056 1496 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 ARAP1Q96P48 1450 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 A0A087WV48 116 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 SRRM4A7MD48 611 aaKnown RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 SRPX2O60687 465 aaPredicted RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 KBTBD11O94819 623 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 FAM58BPP0C7Q3 252 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 ZBTB25P24278 435 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 PRKCIP41743 596 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 PPIAP62937 165 aaKnown RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 IGLV3-21P80748 117 aaPredicted RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 RFTN2Q52LD8 501 aaPredicted RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 MARC1Q5VT66 337 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 ARMCX5Q6P1M9 558 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 RFPL4BQ6ZWI9 263 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 CCDC186Q7Z3E2 898 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 TBC1D10CQ8IV04 446 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 PARP8Q8N3A8 854 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 SMYD1Q8NB12 490 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 OR13C5Q8NGS8 318 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 GPR148Q8TDV2 347 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 PCNPQ8WW12 178 aaKnown RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 EXOC4Q96A65 974 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 ANKRD27Q96NW4 1050 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 PRMT1Q99873 361 aaKnown RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 HSD17B14Q9BPX1 270 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 SLC39A8Q9C0K1 460 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 MTIF3Q9H2K0 278 aaKnown RBP3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 SP140LQ9H930 580 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 SLC6A5Q9Y345 797 aa3.3□□□□□ -1.88
UBE2D3-225ENST00000508476 MYO15BQ96JP2 1530 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 ZNF724A8MTY0 619 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 FRAT2O75474 233 aaPredicted RBP3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 FGF19O95750 216 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 TIA1P31483 386 aaKnown RBP eCLIP3.29□□□□□ -1.883e-7■□□□□ 10
UBE2D3-225ENST00000508476 DRD3P35462 400 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 NAGLUP54802 743 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 RPP38P78345 283 aaKnown RBP3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 ABRQ12979 859 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 FASTKQ14296 549 aaKnown RBP3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 RFTN1Q14699 578 aaPredicted RBP3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 ZNF79Q15937 498 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 ARMCX4Q5H9R4 360 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 SHEQ5VZ18 495 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 PLPP4Q5VZY2 271 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 SPATA21Q7Z572 469 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 OR6F1Q8NGZ6 308 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 CNDP2Q96KP4 475 aaKnown RBP3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 LINC00167Q96N53 147 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 SH3GLB2Q9NR46 395 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 GMEB2Q9UKD1 530 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 IKZF3Q9UKT9 509 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 HBS1LQ9Y450 684 aaKnown RBP3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 SCRIBQ14160 1630 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 SMARCA2P51531 1590 aa3.29□□□□□ -1.88
UBE2D3-225ENST00000508476 NCAPD3P42695 1498 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 A0A0B4J203 849 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 A0A0U1RQG5 324 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 C5orf52A6NGY3 159 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 PIGRP01833 764 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 KRT6AP02538 564 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 KRT6BP04259 564 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 SLC1A6P48664 564 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 KRT6CP48668 564 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 CEACAM7Q14002 265 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 VWA2Q5GFL6 755 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 PAMR1Q6UXH9 720 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 PCGF5Q86SE9 256 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 CCDC71Q8IV32 467 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 ZNF781Q8N8C0 355 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms