RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 GPRC5BQ9NZH0 403 aa12.18□□□□□ -0.46
DDR1-262ENST00000508312 CLEC2DQ9UHP7 191 aa12.18□□□□□ -0.46
DDR1-262ENST00000508312 TMCC3Q9ULS5 477 aa12.18□□□□□ -0.46
DDR1-262ENST00000508312 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
DDR1-262ENST00000508312 IGLV3-10A0A075B6K4 115 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ACSL4O60488 711 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 CPSF4O95639 269 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 IGHA2P01877 340 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 HLA-DPA1P20036 260 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 CDH12P55289 794 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ZXDBP98169 803 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 GTF2H2Q13888 395 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 GPNMBQ14956 572 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 GLYR1Q49A26 553 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 SPOUT1Q5T280 376 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 PTRHD1Q6GMV3 140 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 GTF2H2CQ6P1K8 395 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 FAHD1Q6P587 224 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 TRIM69Q86WT6 500 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 TEX26Q8N6G2 289 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ST8SIA4Q92187 359 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ZBED6CLQ96FA7 236 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 OPALINQ96PE5 141 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 CIPCQ9C0C6 399 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 LRTM1Q9HBL6 345 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PLCXD1Q9NUJ7 323 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 TMEM184CQ9NVA4 438 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 RBFOX1Q9NWB1 397 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 CFAP20Q9Y6A4 193 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 DOCK6Q96HP0 2047 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PATJQ8NI35 1801 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 DOCK4Q8N1I0 1966 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PCDH17O14917 1159 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 OPN1SWP03999 348 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PROS1P07225 676 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ZNF140P52738 457 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 SMSP52788 366 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 SRP54P61011 504 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 C2orf80Q0P641 193 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 COL9A2Q14055 689 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 ARHGEF7Q14155 803 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 FCN2Q15485 313 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 SF1Q15637 639 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 DGKKQ5KSL6 1271 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 TXNDC8Q6A555 127 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ZNF551Q7Z340 670 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 OR52E4Q8NGH9 312 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 C9orf43Q8TAL5 461 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 NIPSNAP1Q9BPW8 284 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 TMEM245Q9H330 911 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PDFQ9HBH1 243 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 HHATLQ9HCP6 504 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PTPRDP23468 1912 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 A0A1W2PQ45 241 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 A0A1W2PQY0 241 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 KCNJ13O60928 360 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ULK1O75385 1050 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 CCNB2O95067 398 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PRAMEF1O95521 474 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 FOSL1P15407 271 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 HOXB8P17481 243 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 ARF5P84085 180 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 SPIBQ01892 262 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 LRRC32Q14392 662 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 GRM7Q14831 915 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 BHLHB9Q6PI77 547 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 RNF180Q86T96 592 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 NKAPQ8N5F7 415 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 CD200R1Q8TD46 325 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 UROC1Q96N76 676 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 TRIB3Q96RU7 358 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 HDHD2Q9H0R4 259 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 SAV1Q9H4B6 383 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 ELF5Q9UKW6 265 aaPredicted RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 MRPS7Q9Y2R9 242 aaKnown RBP12.17□□□□□ -0.46
DDR1-262ENST00000508312 PRSS21Q9Y6M0 314 aa12.17□□□□□ -0.46
DDR1-262ENST00000508312 PRR23AA6NEV1 266 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 MTX2O75431 263 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 OR1E2P47887 323 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 EXOSC2Q13868 293 aaKnown RBP12.16□□□□□ -0.46
DDR1-262ENST00000508312 UGT8Q16880 541 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 OR4F3Q6IEY1 312 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDR1-262ENST00000508312 DNAJC5GQ8N7S2 189 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 ZNF366Q8N895 744 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 OR9Q2Q8NGE9 314 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 PANX1Q96RD7 426 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 RAD9AQ99638 391 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 MS4A7Q9GZW8 240 aaPredicted RBP12.16□□□□□ -0.46
DDR1-262ENST00000508312 TRAV6A0A075B6T7 132 aa12.16□□□□□ -0.46
DDR1-262ENST00000508312 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.16□□□□□ -0.46
DDR1-262ENST00000508312 WASH4PA8MWX3 477 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms