RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TRIM69Q86WT6 500 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 MISPQ8IVT2 679 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 OR11H4Q8NGC9 324 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 OR4K15Q8NH41 348 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 OR56A3Q8NH54 315 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TM4SF18Q96CE8 201 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 COQ8BQ96D53 544 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 RRNAD1Q96FB5 475 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 BOD1Q96IK1 185 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ADAD1Q96M93 576 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ZDHHC15Q96MV8 337 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 KCNS3Q9BQ31 491 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF577Q9BSK1 485 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 MCOLN1Q9GZU1 580 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 PDGFCQ9NRA1 345 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 SMPD4Q9NXE4 827 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TAS2R14Q9NYV8 317 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 GCNT4Q9P109 453 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 CFAP97Q9P2B7 532 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 EMCNQ9ULC0 261 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 NDRG4Q9ULP0 352 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 TEX264Q9Y6I9 313 aa10.39□□□□□ -0.75
PDLIM5-210ENST00000508216 COL1A1P02452 1464 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 METTL21EPA6NDL7 271 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 C1orf196B1AJZ1 125 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 M0QZ92 97 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 LRRTM2O43300 516 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 TULP3O75386 442 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 NXPH2O95156 264 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MMP10P09238 476 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HIST1H2AGP0C0S8 130 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MYOGP15173 224 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HOXB6P17509 224 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HIST1H2ADP20671 130 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 AGAP20933 346 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HIBADHP31937 336 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 STAT5AP42229 794 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MC2RQ01718 297 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 USP10Q14694 798 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 PTGR1Q14914 329 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 EIF4HQ15056 248 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 DEFB115Q30KQ5 88 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 USP39Q53GS9 565 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 TRIM61Q5EBN2 209 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 FAM26FQ5R3K3 315 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HACD4Q5VWC8 232 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MEDAGQ5VYS4 303 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HIST2H2AA3Q6FI13 130 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 JADE1Q6IE81 842 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 LRRC8EQ6NSJ5 796 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 KLHL17Q6TDP4 642 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 FAM198BQ6UWH4 519 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 TRIM46Q7Z4K8 759 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF383Q8NA42 475 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ANKRD52Q8NB46 1076 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 TRMT10AQ8TBZ6 339 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MRGPRDQ8TDS7 321 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 OSTF1Q92882 214 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 SLAMF9Q96A28 289 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ORAI1Q96D31 301 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HMCESQ96FZ2 354 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 PEX11GQ96HA9 241 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HIST1H2AHQ96KK5 128 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 LRR1Q96L50 414 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF354BQ96LW1 612 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MBOAT4Q96T53 435 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 HIST1H2AJQ99878 128 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MAPKAP1Q9BPZ7 522 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 MESP1Q9BRJ9 268 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 C1QTNF6Q9BXI9 259 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 RBCK1Q9BYM8 510 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ENKD1Q9H0I2 346 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 NXF3Q9H4D5 531 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 SCN11AQ9UI33 1791 aa10.38□□□□□ -0.75
PDLIM5-210ENST00000508216 A0A087X0M5 115 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 A0A1B0GX30 115 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 LNP1A1A4G5 178 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OR6C75A6NL08 312 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TRDCB7Z8K6 153 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SMLR1H3BR10 107 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 M0R2N6 131 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TPP1O14773 563 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CACNG3O60359 315 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ZFPL1O95159 310 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SPARCP09486 303 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 FGRP09769 529 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TXNP10599 105 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 S1PR1P21453 382 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ARRB2P32121 409 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 GMPSP49915 693 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RAB5CP51148 216 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ACSM1Q08AH1 577 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 BOP1Q14137 746 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 HSDL1Q3SXM5 330 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms