RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 VSTM2BA6NLU5 285 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 LSM1O15116 133 aaKnown RBP18.96■□□□□ 0.63
USP53-203ENST00000507597 KLK10O43240 276 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 BMP10O95393 424 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 HEXBP07686 556 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 FHP07954 510 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 ANXA4P09525 319 aaPredicted RBP18.96■□□□□ 0.63
USP53-203ENST00000507597 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 PRPS2P11908 318 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 TIA1P31483 386 aaKnown RBP eCLIP18.96■□□□□ 0.63
USP53-203ENST00000507597 UCNP55089 124 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 CLN3Q13286 438 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 SSPNQ14714 243 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 HEPACAMQ14CZ8 416 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 NOXRED1Q6NXP6 359 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 FAM198BQ6UWH4 519 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 ZNF793Q6ZN11 406 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 COX15Q7KZN9 410 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 ENDOVQ8N8Q3 282 aaKnown RBP18.96■□□□□ 0.63
USP53-203ENST00000507597 FNDC5Q8NAU1 212 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 OR2Y1Q8NGV0 311 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 METTL21AQ8WXB1 218 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 RNF31Q96EP0 1072 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 IP6K3Q96PC2 410 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 CCNL2Q96S94 520 aaPredicted RBP18.96■□□□□ 0.63
USP53-203ENST00000507597 SEMA3GQ9NS98 782 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 SLC22A11Q9NSA0 550 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 TCFL5Q9UL49 500 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 PTRH2Q9Y3E5 179 aaKnown RBP18.96■□□□□ 0.63
USP53-203ENST00000507597 MMACHCQ9Y4U1 282 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 CCL27Q9Y4X3 112 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 DCHS1Q96JQ0 3298 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 C4orf51C9J302 202 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 TLX3O43711 291 aaPredicted RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 PEX11AO75192 247 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 LBPP18428 481 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 EIF2S3P41091 472 aaKnown RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 ASMTP46597 345 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 EMP2P54851 167 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 OLR1P78380 273 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 MAT1AQ00266 395 aaKnown RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 RUNX2Q13950 521 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 MRM1Q6IN84 353 aaKnown RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 OR5T3Q8NGG3 340 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 CEP70Q8NHQ1 597 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 TANKQ92844 425 aa18.95■□□□□ 0.62
USP53-203ENST00000507597 NAF1Q96HR8 494 aaKnown RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 ZNF717Q9BY31 904 aaPredicted RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 NSRP1Q9H0G5 558 aaKnown RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 AKIRIN1Q9H9L7 192 aaPredicted RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 C19orf25Q9UFG5 118 aaPredicted RBP18.95■□□□□ 0.62
USP53-203ENST00000507597 SPTBP11277 2137 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 CACNA1AO00555 2505 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 ATP6AP2A0A1C7CYW4 349 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 C1orf226A1L170 272 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 PRMT3O60678 531 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 EEDO75530 441 aaKnown RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 ATP6AP2O75787 350 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 B3GALT4O96024 378 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 DRD2P14416 443 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 TPP2P29144 1249 aaPredicted RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 RPL3P39023 403 aaKnown RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 HSD17B7P56937 341 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 ERVK-8P63133 956 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 RPL38P63173 70 aaKnown RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 EMX2Q04743 252 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 ZNF763Q0D2J5 394 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 MINDY4Q4G0A6 757 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 C6orf136Q5SQH8 315 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 NXNQ6DKJ4 435 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 IKBIPQ70UQ0 350 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 SPATA19Q7Z5L4 167 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 RAB43Q86YS6 212 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 TMEM132CQ8N3T6 1108 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 ZCCHC14Q8WYQ9 949 aaKnown RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 SLC45A3Q96JT2 553 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 MAPKAP1Q9BPZ7 522 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 CRB3Q9BUF7 120 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 SORBS1Q9BX66 1292 aaKnown RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 TMEM121BQ9BXQ6 578 aaPredicted RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 NOP53Q9NZM5 478 aaKnown RBP18.94■□□□□ 0.62
USP53-203ENST00000507597 CTSFQ9UBX1 484 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 MKL2Q9ULH7 1088 aa18.94■□□□□ 0.62
USP53-203ENST00000507597 ZNF891A8MT65 544 aaPredicted RBP18.93■□□□□ 0.62
USP53-203ENST00000507597 C1QTNF9BB2RNN3 333 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 POLR3GO15318 223 aaPredicted RBP18.93■□□□□ 0.62
USP53-203ENST00000507597 PROM1O43490 865 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 DIAPH2O60879 1101 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 C1QTNF9P0C862 333 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 NR2F6P10588 404 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 IRX1P78414 480 aaPredicted RBP18.93■□□□□ 0.62
USP53-203ENST00000507597 TNFRSF17Q02223 184 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 KIAA0040Q15053 153 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 TGIF1Q15583 401 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 SYT16Q17RD7 645 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 VWA2Q5GFL6 755 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 LCN10Q6JVE6 187 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 QSOX2Q6ZRP7 698 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 ZC3H7AQ8IWR0 971 aaKnown RBP18.93■□□□□ 0.62
USP53-203ENST00000507597 SAMD14Q8IZD0 417 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms