RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 C1orf52Q8N6N3 182 aaKnown RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 OR2Y1Q8NGV0 311 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 TBC1D20Q96BZ9 403 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 MIEF2Q96C03 454 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 PEX11GQ96HA9 241 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 MAPKAP1Q9BPZ7 522 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 YIPF2Q9BWQ6 316 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 ACTL8Q9H568 366 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 SLCO1B3Q9NPD5 702 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 LANCL2Q9NS86 450 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 PADI2Q9Y2J8 665 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 CACNA1GO43497 2377 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 PROM1O43490 865 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 JRKO75564 520 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 CREG1O75629 220 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 GBAP04062 536 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 UMODP07911 640 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FHP07954 510 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FAM58BPP0C7Q3 252 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 HK2P52789 917 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 EFNA3P52797 238 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 HNRNPH2P55795 449 aaKnown RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 ACSM2AQ08AH3 577 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 ERV3-1Q14264 604 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 SSPNQ14714 243 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 CRTC2Q53ET0 693 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FAM69BQ5VUD6 431 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 ACSM2BQ68CK6 577 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 LRRC69Q6ZNQ3 347 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FAM76AQ8TAV0 307 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 PIWIL2Q8TC59 973 aaKnown RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 ADAMTS18Q8TE60 1221 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 C19orf60Q96EN9 201 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FCRL1Q96LA6 429 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 CCDC134Q9H6E4 229 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 SOX17Q9H6I2 414 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 MEAF6Q9HAF1 191 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 PFDN4Q9NQP4 134 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 C1orf109Q9NX04 203 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 LYARQ9NX58 379 aaKnown RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 MS4A12Q9NXJ0 267 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FAM53CQ9NYF3 392 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 MCM8Q9UJA3 840 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 PTRH2Q9Y3E5 179 aaKnown RBP12.11□□□□□ -0.47
TCOF1-210ENST00000506767 AHCTF1Q8WYP5 2266 aa12.11□□□□□ -0.47
TCOF1-210ENST00000506767 FREM2Q5SZK8 3169 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 FAM227AF5H4B4 570 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 SLCO1B7G3V0H7 640 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 ZNF195O14628 629 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 HDAC3O15379 428 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 SEC22BO75396 215 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 CYC1P08574 325 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 PRR35P0CG20 571 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 ITPKBP27987 946 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 TIA1P31483 386 aaKnown RBP eCLIP12.1□□□□□ -0.47
TCOF1-210ENST00000506767 MDH1P40925 334 aaKnown RBP12.1□□□□□ -0.47
TCOF1-210ENST00000506767 FOLR3P41439 243 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
TCOF1-210ENST00000506767 RHAGQ02094 409 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 IL10RAQ13651 578 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 PDCD2Q16342 344 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-210ENST00000506767 RFTN2Q52LD8 501 aaPredicted RBP12.1□□□□□ -0.47
TCOF1-210ENST00000506767 SPDYAQ5MJ70 313 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 CYP20A1Q6UW02 462 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 SHISA6Q6ZSJ9 500 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 GPR180Q86V85 440 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 CRLF3Q8IUI8 442 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 WDR75Q8IWA0 830 aaKnown RBP12.1□□□□□ -0.47
TCOF1-210ENST00000506767 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 PLPP5Q8NEB5 264 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 STARD8Q92502 1023 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 NACC2Q96BF6 587 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 CSF3RQ99062 836 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 VN1R1Q9GZP7 353 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 LRTM1Q9HBL6 345 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 VTI1BQ9UEU0 232 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 PHF11Q9UIL8 331 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 FBXW2Q9UKT8 454 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 ATG4BQ9Y4P1 393 aa12.1□□□□□ -0.47
TCOF1-210ENST00000506767 ATP6AP2A0A1C7CYW4 349 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 A0A1W2PR48 441 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 BLACEA4D250 179 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 IDSB3KWA1 339 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 PSMD12O00232 456 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-210ENST00000506767 PCDH7O60245 1069 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 ATP6AP2O75787 350 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 IGHEP01854 428 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 KITP10721 976 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 CPN2P22792 545 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 JAK1P23458 1154 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 MMP11P24347 488 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 HNRNPFP52597 415 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms