RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 BCL2L11O43521 198 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 RAD51DO75771 328 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 OR6B1O95007 311 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 LETM1O95202 739 aaPredicted RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 ODC1P11926 461 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 LMO2P25791 158 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 OXTRP30559 389 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 MAGEB1P43366 347 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 ST8SIA6P61647 398 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 RIGQ13278 110 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 SIX1Q15475 284 aaPredicted RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 POM121L1PQ3SYA9 428 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 KBTBD12Q3ZCT8 623 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 ZNF841Q6ZN19 808 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 PIWIL3Q7Z3Z3 882 aaKnown RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 RPAINQ86UA6 219 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 TUSC5Q8IXB3 177 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 CSNK1G2-AS1Q8NCQ2 148 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 OR6F1Q8NGZ6 308 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 GDAP1Q8TB36 358 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 UBLCP1Q8WVY7 318 aaPredicted RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 LIPHQ8WWY8 451 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 RFT1Q96AA3 541 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 JAKMIP1Q96N16 626 aaKnown RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 ALKBH3Q96Q83 286 aaPredicted RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 TAAR6Q96RI8 345 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 HNRNPABQ99729 332 aaKnown RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 ZNF559Q9BR84 538 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 DCTN5Q9BTE1 182 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 UTP14AQ9BVJ6 771 aaKnown RBP2.29□□□□□ -2.04
GYPB-207ENST00000506679 MOB1AQ9H8S9 216 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 JPT2Q9H910 190 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 GRPEL1Q9HAV7 217 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 SPATA2Q9UM82 520 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 SMAD5-AS1Q9Y6J3 95 aa2.29□□□□□ -2.04
GYPB-207ENST00000506679 IGHV3-16A0A0C4DH30 117 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 A0A0U1RQK1 487 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ATP6AP2A0A1C7CYW4 349 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 MAGEB16A2A368 324 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ZNF320A2RRD8 509 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 FAM149AA5PLN7 773 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 SLC33A1O00400 549 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 TTI1O43156 1089 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 SYT7O43581 403 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ATP9AO75110 1047 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 CSDE1O75534 798 aaKnown RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 HSP90AB1P08238 724 aaKnown RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 ADORA3P0DMS8 318 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 GJB2P29033 226 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ZFP36L2P47974 494 aaKnown RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 FHITP49789 147 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 GSK3BP49841 420 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 CCR4P51679 360 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 LIMK2P53671 638 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 YWHAHQ04917 246 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 FCHO2Q0JRZ9 810 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 NFE2L1Q14494 772 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 MEF2DQ14814 521 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ACKR1Q16570 336 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ZNF239Q16600 458 aaKnown RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 CCL14Q16627 93 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 RFTN2Q52LD8 501 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 C9orf66Q5T8R8 295 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 LRRC38Q5VT99 294 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 NEPROQ6NW34 567 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 RFPL4BQ6ZWI9 263 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 CYP4V2Q6ZWL3 525 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 Q71RC1 249 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 TIPARPQ7Z3E1 657 aaKnown RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 CACUL1Q86Y37 369 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ZNF444Q8N0Y2 327 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 ELMOD1Q8N336 334 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 FGFRL1Q8N441 504 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 C4orf32Q8N8J7 132 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 OR2L2Q8NH16 312 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 EPSTI1Q96J88 318 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 PANX3Q96QZ0 392 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 IDI2Q9BXS1 227 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 NUSAP1Q9BXS6 441 aaKnown RBP2.28□□□□□ -2.04
GYPB-207ENST00000506679 LRRC2Q9BYS8 371 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 TRIM7Q9C029 511 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 C2orf40Q9H1Z8 148 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ADNPQ9H2P0 1102 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ZNF665Q9H7R5 613 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 S100A14Q9HCY8 104 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 RPS10P5Q9NQ39 176 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 DEPPQ9NTK1 212 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 TMEM161AQ9NX61 479 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 CNIH4Q9P003 139 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 THYN1Q9P016 225 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 ETV7Q9Y603 341 aa2.28□□□□□ -2.04
GYPB-207ENST00000506679 TRGV8A0A0C4DH27 118 aa2.27□□□□□ -2.05
GYPB-207ENST00000506679 BCLAF3A2AJT9 711 aaKnown RBP2.27□□□□□ -2.05
GYPB-207ENST00000506679 ZNF724A8MTY0 619 aa2.27□□□□□ -2.05
GYPB-207ENST00000506679 FBP2O00757 339 aa2.27□□□□□ -2.05
GYPB-207ENST00000506679 CCSO14618 274 aa2.27□□□□□ -2.05
GYPB-207ENST00000506679 TXNL1O43396 289 aa2.27□□□□□ -2.05
GYPB-207ENST00000506679 GALR3O60755 368 aaPredicted RBP2.27□□□□□ -2.05
GYPB-207ENST00000506679 FRAT2O75474 233 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms